Gene Dtox_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3234 
Symbol 
ID8430228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3434561 
End bp3435928 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content38% 
IMG OID645035478 
ProductVanW family protein 
Protein accessionYP_003192597 
Protein GI258516375 
COG category[V] Defense mechanisms 
COG ID[COG2720] Uncharacterized vancomycin resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.332882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAA CCAGGCTAAC CTCCAAGGTT ATCCTTATTA CGGTTTTTCA ATTAATAGTA 
TGTATCAGTC TGTCCAGCTT TGCACTAAAG TTTTATTACA GCAAGGTGGT TTTACCGGGC
ATTACTGTAC AAGGCGTCAA TATCGGAAGC CTAACATATA GTCAAGCAGT AGAAAAATTG
AAACAGGATC TGCCATATCC CTCCCCAAAA ATGATATTGC AAGTTGGTCT CATTAAATAC
GGTGAGATTC AATATACAAC TGATTACGAA GCTACTGTAA GAGAAGCTAT AAAATACAGT
CAGAAACTCT CTTCACGACA AATTATAAAA CTAATGTTTA GCAACACCAA AACCCATGAC
TTTGTGCTCA CAAAAACATA TAACGATAAA ATTCTGAATG AAATACTGGA CAAAGCAGCC
TCTCAGTATT ACGAAGCCGT TCAAAATGCT TATATATCTT TTGATGAAAA AACTGCCACA
GTATTTCAGG ATACTTATGG TAGAAAATTA GATAAAGAGG CTTCGATACA AAAATTTATC
AGCAGTCCTT ACGGTAATAC TTATTTGGCA TTATCTTTTC AGATTACTGA GCCTACCAGG
AAAACACCCG ATTACGATGG AATAAATTCG CGGCTTTCCC TATTTGTAAG CGACTTTGAT
GTTAATGAAA CTGACCGAAC CAGGAATATT GAATTAGCCA GTGAGTCAAT TAATAACGTT
ATTATAAGAC CGGGAGAGGT CTTTTCCTTA AATAAAACTT TGGGTAAGCG TACTTCGGAG
GCAGGATATC GTAAAACACT AGAAAATACT TATGACGTTG ATTTAATAGC CAGCCATGAG
GCAGGCATCT GTCAGGTTGC CGGCACCCTG TATAATGCGG TTTGCCGGGC AGGATTAACA
GTAGTTGAAA AAAGAATTAA TCCCGTACCG GTCCCATACA TACCTGAGAA CATGGAGTCT
GTCATTGCAG ATGAAAATAA TGATTTTAAA TTTGCCAATA ACACTTCAAA AAACATTTTA
ATAGCCAGTC AGATTCACCA GGGAGAATTG AAGATATGCA TTATGGGGCA CAAAGGGTCT
ACCCCGGTCA GACAAATAAA AACAGAAAAA GAAAGATATG TGACAAGTCC GCCCAAACAA
TATGTGCTGG ATCCCACACT TCCCCCCGGT CTGGTGATAA TTCGCAATCC TGGCAGCAAC
GGCTACGCAA TGAAAATATA TGAGGTTATT TTGAAAAATG AGCGGGAAAT TGACAGGATA
TTAACCGCTG CCATTGAAAT TGAACCGGAA CCGGAGTTGT TAGCCATTAG TCCCATGCGT
TCTACAATAG CGAACCTGTT TAGAAAAGAA CCTCTTAAGT TCAAATAA
 
Protein sequence
MNKTRLTSKV ILITVFQLIV CISLSSFALK FYYSKVVLPG ITVQGVNIGS LTYSQAVEKL 
KQDLPYPSPK MILQVGLIKY GEIQYTTDYE ATVREAIKYS QKLSSRQIIK LMFSNTKTHD
FVLTKTYNDK ILNEILDKAA SQYYEAVQNA YISFDEKTAT VFQDTYGRKL DKEASIQKFI
SSPYGNTYLA LSFQITEPTR KTPDYDGINS RLSLFVSDFD VNETDRTRNI ELASESINNV
IIRPGEVFSL NKTLGKRTSE AGYRKTLENT YDVDLIASHE AGICQVAGTL YNAVCRAGLT
VVEKRINPVP VPYIPENMES VIADENNDFK FANNTSKNIL IASQIHQGEL KICIMGHKGS
TPVRQIKTEK ERYVTSPPKQ YVLDPTLPPG LVIIRNPGSN GYAMKIYEVI LKNEREIDRI
LTAAIEIEPE PELLAISPMR STIANLFRKE PLKFK