Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3218 |
Symbol | |
ID | 8430212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3416126 |
End bp | 3416899 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645035462 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_003192581 |
Protein GI | 258516359 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000318733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000151601 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCAGGG TGTATGTACC GCCTACCCGC ATAAAGGGTA GGCAGGCTTG CATTACGGGG ACGGAAATGG AGCACGTCAA CCGCGTTTTG CGCCTGGCAG CCGGAGATGA AGTGACCATA ATCGACGGTG AGGGCGGTGT ATTTTCAGCC CGTATTACCG GGAAAAATAA AGAAAAAGTC TTCTGCGAAA TAACCGCTGA GGGCCTGCCC GATAACGAGC CCCCGGTCAA AATAACCCTG GTTCAGGGAC TGCCCAAGTC CGACAAAATG GACTTAATCG TACAGAAAGG CACCGAGCTG GGCCTGTCCA CACTCATACC CCTGCAGTGT GAGCGGGCGA TAGTCCGCCT GGACGAAAAA AAAGCCGCTC AGCGCCAGGA ACGCTGGCAG AGAATTGCCA TGGAAGCGGC CAAACAGTGC AAAAGGGGCA AGCACCCGTC GGTAGAGAGA GCCATGAGCT GGCAAGAAGT CTTGGAGTCC CTGCCCGAGA AAGCGCTGTG CCTGCTGCCC TGGGAAGAGG AAACAGCCAG AGGCCTGAAA AGCCTGCGCG ATAATCTGGA AGCTAAAGTC CCCCCTTTCG AAATCTATAT CTTCATAGGC CCCGAGGGTG GCTTCACCAG GTCGGAAGCA GCACAGGCGC GGCAGTACGG AGTAATCCCC GTCTCCCTGG GTCCCCGCAT ACTGCGCACA GAAACCGCCG GCATAGCTGT CTTAAGCATA ATCATGTACG AGTTCGGCGA TTTAGGCGGA ACCCCGGCTG ACTATAAAAG TTAG
|
Protein sequence | MTRVYVPPTR IKGRQACITG TEMEHVNRVL RLAAGDEVTI IDGEGGVFSA RITGKNKEKV FCEITAEGLP DNEPPVKITL VQGLPKSDKM DLIVQKGTEL GLSTLIPLQC ERAIVRLDEK KAAQRQERWQ RIAMEAAKQC KRGKHPSVER AMSWQEVLES LPEKALCLLP WEEETARGLK SLRDNLEAKV PPFEIYIFIG PEGGFTRSEA AQARQYGVIP VSLGPRILRT ETAGIAVLSI IMYEFGDLGG TPADYKS
|
| |