Gene Dtox_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3001 
Symbol 
ID8429991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3201136 
End bp3201624 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content38% 
IMG OID645035254 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003192377 
Protein GI258516155 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0454064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCTGA CCGGAACGGT GGTGAATTAT TATACGCATT GTCAAAGGCA ATGTTGGTTG 
TTTTACCACA AAATAAATTT GGAGGACAAT TCAGAAGATG TACGGGTTGG GAAAATAATG
CATGAATTAA AAAAGCAGGA CAAAGATGAG ATAGCGCTGG AGGGTATCAA GCTTGATAAA
TTAACGGCGG AATATGTTGT TGAAATCAAA AAATCTGATG CTGATCTGGC AGCGGCCAGA
GCCCAATTGG AGTTTTATTT GGTTGTTTTA CACGACAAAG GAGTTAATCG AAAAGGACGT
TTGGAATGTC TGGAAAAAAA TAAACAAAGT AAAAGCGTTC ATACTTTGAT ACTGACGGAA
GAAGATATTA GGGATTGCAA GACCCAATAC CAGCAAATAG AGGAATTCTT AAAACAAGAA
CTGCCGCCTC CGCCTATTCG AAAGCCGACT TGTAAAAAAT GTGCATATTT TGAATACTGT
TTCATTTAG
 
Protein sequence
MMLTGTVVNY YTHCQRQCWL FYHKINLEDN SEDVRVGKIM HELKKQDKDE IALEGIKLDK 
LTAEYVVEIK KSDADLAAAR AQLEFYLVVL HDKGVNRKGR LECLEKNKQS KSVHTLILTE
EDIRDCKTQY QQIEEFLKQE LPPPPIRKPT CKKCAYFEYC FI