| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2920 |
|---|
| Symbol | |
|---|
| ID | 8429910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3100308 |
|---|
| End bp | 3101825 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645035176 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003192299 |
|---|
| Protein GI | 258516077 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.214189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATAATA CGGATTCCGC TGTTAAGCAA CCAAATAAAA TTCTAGCTCT TTTAAAAGGT
AAAAAATTTC TGTTTCGTTT ATTAGCCATT CTGGCAGTAG GATTGGTTGG CGCCTATTTT
TTTCAGAGAT CTAATAAAAC TGAGGTAAGT TATATTACTG ATACTGTTAA AAAGGGATCT
GTAACCAATA CCATTCCGGC TACCGGTACC ATAGAGCCGG TAAGCACAGT ATCCTTAAGT
TTTGAGAATG CTGAGGTAAT AAAGAAAATA TATGTAAAAA CAGGGGATCC GGTTACTGCC
GGACAACTGC TGGCTGAGCA GGAAGAAGAT AGCCTGCAAG CTCAGTTGAC TCAGAGTTCA
GCAAGTTTAA AGTCAAATGC CGCTAAACTG GCACTTCTGA AAAAAGGTTC TACTGAAGAG
GAGATAGCTA AGGCTGAGTC AAGTGTAAAG GTGGCTCGTT CAGCGTATGA ACTGGTAAAA
TCAAAACTTG ATAAGAATCA AAAACTTCTT GCTGAGAAGG TTATATCACA GACTGATTTT
GACGATATAA ACAATGAATT TATCAGCGCG GAGGGTAATT TAAAACAGGC TGAGGAAGCC
TTAAAATCGT TGCAAAAAGG AAACAGAATA GAAGAAATAG AACAAGCTGA GGCTCAGGTT
GAAAGCAGTA ATGCACAGCT TAAAATAGCT CAAAAAGACC TGGCTGGTAC AAAAATGATC
AGTCCTATGG ATGGTATAGT AAGCGAAGTA AATGGGGGGG AAGGGCAGAG GGCAACGGCC
AACAATAACA GTACGAGCAG CGGGACAGGC TTTATAGTTC TGATTTCGAA ATCTCTGCAG
GTTGAAGCTC AAGTTAATGA AGCTGATATT GGCAAGTTAG AAATTGGCCA GACAGCGGAA
TTTACGGTCA ATTCTTATCC AAACAAAGTT TTCACCGGAA AGGTAAGCAG TATTTCTCCG
GAGGCAGAAA CTGTATCTAA TGTGCAGGTT TACAATATAA TTATTCAATT AGAGGGTGAG
CAGCAGGAAT TGAAAGCCGG TATGCCTGCA AACCTAAACA TAATAATTAA TAAAAAAGAA
AACACATTGA CTGTGCCTAA AGGAGCAGTT ACTTATGCCA CCAGCTATCT CAGTAAAAAT
GAACAGAGCA CTGCTTTAAA AACGGAAGCA ACAGGCAATC AAACCAAAAG CAGCAACAGC
GGCAACAATT CCGGCAGCTC AAAAGGTTCA ATTAGATCCG GCAGCGGCCA GGCAGCTACA
ACTTCAGGAG CGGCCAAGGA AAGCAGTCAA AAAACACAGA CCACTATAAT CGGTAAAGAT
GAATCGGGTA AACCGGTTTC TCATCAAGTG CTATTAGGCT TGTCGGATTC GAAAAACTAT
GAAATATTGG AAGGTCTTAA CGAAGGTGAC ATTGTAATAG TAGGGGACAG CAGCGCAACA
AGTACCGGGA CTGCGAGCAC CAGTAAGAGC AGTAGTGGCG GCGGCGGTTT GCTGGGAGGC
GGAGGGCCTC CGCGGTAA
|
|---|
| Protein sequence | MHNTDSAVKQ PNKILALLKG KKFLFRLLAI LAVGLVGAYF FQRSNKTEVS YITDTVKKGS
VTNTIPATGT IEPVSTVSLS FENAEVIKKI YVKTGDPVTA GQLLAEQEED SLQAQLTQSS
ASLKSNAAKL ALLKKGSTEE EIAKAESSVK VARSAYELVK SKLDKNQKLL AEKVISQTDF
DDINNEFISA EGNLKQAEEA LKSLQKGNRI EEIEQAEAQV ESSNAQLKIA QKDLAGTKMI
SPMDGIVSEV NGGEGQRATA NNNSTSSGTG FIVLISKSLQ VEAQVNEADI GKLEIGQTAE
FTVNSYPNKV FTGKVSSISP EAETVSNVQV YNIIIQLEGE QQELKAGMPA NLNIIINKKE
NTLTVPKGAV TYATSYLSKN EQSTALKTEA TGNQTKSSNS GNNSGSSKGS IRSGSGQAAT
TSGAAKESSQ KTQTTIIGKD ESGKPVSHQV LLGLSDSKNY EILEGLNEGD IVIVGDSSAT
STGTASTSKS SSGGGGLLGG GGPPR
|
|---|
| |