| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2902 |
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| Symbol | |
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| ID | 8429892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 3079669 |
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| End bp | 3083484 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645035163 |
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| Product | YD repeat protein |
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| Protein accession | YP_003192286 |
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| Protein GI | 258516064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.729617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGAAA TTAGCGACCC GGCCAACCGG ACCGTGGTTT TTACCTATAA TGATAATGGT
AACTTATCCA CAGTCCAGGA TGTTTATGGA GGCATTACCC AGTATAATTA CGATGCCCAC
GGTCTGACAG ACATTATTGA TACCGAAAGT AATCACATTA TCCAGAATAC TTATGACAGC
ATCAGCCGGG TAATAAGCCA AACAGACGCT AAAGGAAATC AAACCCAATT CGCATATGAC
CCAGAAGCTC AACAAACAAC AGTGACCGAC CCACTGGGTA ATTCAGTAAC TATTAATTAT
GATGAAAAAT ACCGCATTGC CGCAATGAAT TATCCTGATA ATATTTCTGA GTCCTTCACC
TATGACGAAA ACAACTGTCG CACATCAGTA ACTGATAAAA ACGGACATAA AATCACGTAT
ACTTATGATA ACATGGGTAA CATGCTGACC AAAACTCAAC CGGTGCCATT TAACTATACC
ACTGCATTTG TGTACGATAG CCTTAACAAC CCCGTTCAGG TTACTGACGC CGCCGGTTAT
GTTACCGATT ACACATACGA TGAAAGGGGT AATTTACTTT CTGTCAGCAA GGCAGTATAT
GGTGGAACAG TCATAACCTC GTTTTCATAT GACCAGTTTG GACAGGCTAT CAATATTACT
GACCCAAATG ACAATAGCAC TTCGGTGACA TACGACGTGT ACGGCAACCG CACCTCGGTT
ACCGGCCCGC TGGGCAACAC CACCACCTAT ACTTACGACA TAATTGGGCG CAAGATAACA
AAGACTGGCC CTAGGGGCAA CGAGCCGGAC GCAAACCCGG AATTGCATTG CTATAGCTAT
ACCTATGACC AGGCAGGCAA TGTTCTTACG GTAACTGACC CATTAGGCAA TGTAACAACC
AACACTTACG ACGCTAACAA CAACCTGATC AGCACCACTG ACCCAAATGG TAACACAACT
ACATTTACTT ATAATGAGAA CAGCAAGCTG GTCACTGAGA CAGACCCGCA TGGCAATACA
ACCACATATC AATATGACAC CAACGGTAAC TTGAGCTCAA TAACCGATGC CAATGGACAT
ATCACCAGTT ACCAGTATGA CGCTCTTGAC CGGTTTGTAT CTACTATGTA CCCGGATGGC
AATACAGAAA ATCTCACTTT GGACGGAAAC GGTAATGTAC TTGCCAGAAC AAATAGCAAG
GGCAACACCA CCAATTACCA GTACGATGAA CTTAACCGCC TGATCAAGAT AACTGACCCG
GCAGGCGGCA GCATCGCCAT GCAATACGAC CCCCTGGGCA ACCAAACCGG TGTCACCGAC
CAGCGCGGCA ACACCACGAC ATATACCTAT GACCAGGCAT CCAAACTGCT TTCTGTTACT
GACTCGTTAG ACAACACCAC CAGCTACACA TATGATCCGG TGGGCAACCG GTTGACTGAA
ACAAACCCGA AAGGAGCTAC CTGGATCTAT ACCTATGACG CAGCAAACCG CCCAGTAAAA
ACAACCGGCC CGTTGGGCCA TGATAGTAGT GTACAATACG ATAGTGCCGG CAACGTTATC
ACCAGCACCA ATACCAACGA AGCCAGCACA TCATTTTCAT ATGACGCCCT TAACAGATTG
TTATCAGTCA CTGACACCCT GGATAACACC ACGGATTACA CGTACGATGG AAATCACAAC
CTGACTGGGG TTACCGACGC CAACGAACAC ACAACAAACT ACACATTCGA CAGTATGAAC
CGCCTGGTGG CTATAACAAA CCCCTTGGGC CAAACCACAA ATTACTCATA CGACCCGGTG
GGCAACCGCG TTACCAGAAC CAAGCCGGAC GGTAACAGCA TTAACTATAG TTATGACAGC
AATAACCGAT TGGTTGAAAT TACCTATCCC GATTCCAATC AAGTCAGCTT CAACTATGAC
GCAAACGGTA ATCGGACAGC AATGACCGAT CCTAAAGGAA CCACCGTTTA CAGCTATGAT
AACCTTGACC GGTTGACCTC GGTAACAAGG GCCGTCTATT CCATTGATTA TAATTACGAT
TTGGCTGGTA ACATCACGGG TATAACCTAC CCTGATGGGT TAAATATAAG TTACACGTAT
AACCGGCTTA ACCAACTGCA ATCAGTATCA GACATCGTGT ATACCGCCAC ATTTACCTAC
GACGAACTGG GTAATATAAT TGGGGAAGAG CTGCCCAACG GTATTACAGT AAGCTATCAA
TATGACGATA ACGGCAGGCT TACTTCACTG CAACATGTTA ATGGCGATAC CGTTCTGACT
GGCGTGGAAT ACACCCTGGA CAACGTAGGC AACAGGTTAA GCGTTACTGA CGAAAACGGT
CAGACAACCA GTTATACTTA CGACAATCTG AATCAACTGA CTAAAGTAAA ATACCTGGAT
GATAACCCGG TCACCTATAC CTACGACCCA GTGGGCAACC GACTCAGCGC CGGTGGCGTA
AACTACACCT ATGACAGTGT CAATCGGCTG ATACAAAAGG GTGGCATTCC TTACGGCTAC
AACGCCAACG GGAACCTCGT ATCGGTTGGT GAATCGGTAT ACTATGATTA TGACTACGAA
GACCGGTTGG TACGCTTTAA TGACGGTAAT AACACATACC GATACACCTA TGACGGTGAC
GGCAATCGCT TGACTCAAAC GGTCAGCGGA GTGGTTTATG GAAGTTACAG TTATATTTAT
GACATCAATG CAGGACTTCC GCTCCTATTG GTAGAAAAAG ACAGTGAAGG CAACACCAAC
AACTATCTTT ACGCTAACGG TCTATACGGT CGCACTGGCC CTGAAGGAAG GTTATTCCAT
CACGCGGACG GTTTGGGTAG CGTATCAGTG GTAAGCGATG TTTACGGCGA GGAGCTCAAC
CGTTACACTT ATGACCCGTT CGGTAATCCC TTAACGGTTA ATGAAACCGT TGACAACATG
TTCCGCTTCA CCGGTGAACC GTATGACCCG AGCGGATTAG TATTCCTGAG AGCGCGGTAC
TATGACCCGT CCACGGGCAG GTTTCTCACC CAGGACATCT ACTCCGGTGA GCTAAACACC
CCGCTGTCGC AGAACCTTTA TATTTATTGT AGTAATAACC CGGTAGTTTA TATAGATCCG
TCTGGGAATA TCAAAATCTG CCAATTGGAT GATTTAGGGA AAGGTTTGTG GGACTCCGGA
GGTGAAGCCG TAAGAGAACT TATGTCTTCA CCAGGCGCAT TATGGGAACT GTCAAAAGCA
ATTTATCGTA ATGAACTGTC AAAGGAGGAT TTAATCCTAG CTTTGGGAAG TGCCGGAGCT
GATATAGCCG GAACAATTAA CTATGTATGG AAACATTCAG ATAGCGTCTG GGTTGGGAAC
CCATCCGACA AAGAAGTTTA CGAGTACGGC AGAAACTTGG GGGATGTACT ACAAATAGCC
GCCGGCAGCG GTGCCGCGTT AAAAGCAATT TCTAAAGTAG CGCCGAAGGC GGCGGGTGCC
CTTGGAAAGG GAACGAGTAA GAGTATTTTA AAAGAAGCTT CTCAATCTGC TTTTAAAGCG
GCAGACAATG TTTCTGATTT TTCAGTTTCA AATAAGCACT TAATGGACGC AGGGGGAAGG
TGGCAAAAGT TTGCTACCAC AGATAAGGGC CAAGTGAATA CTTGGGTGCA AGAAGGCTTA
CGCTCAGGAA ATGCCCAATT TTTACCTAAC AATCAAGAAG CATCATATAA GATTATAACT
GATTTAGGCA AGACTATTGG AACAAAGGGA GAAACAAAAA TTCAAGTTAT TATAGGAGCT
GATGGGAAGA TATGGACTGC ATACCCAGTA AAATAG
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| Protein sequence | MQEISDPANR TVVFTYNDNG NLSTVQDVYG GITQYNYDAH GLTDIIDTES NHIIQNTYDS
ISRVISQTDA KGNQTQFAYD PEAQQTTVTD PLGNSVTINY DEKYRIAAMN YPDNISESFT
YDENNCRTSV TDKNGHKITY TYDNMGNMLT KTQPVPFNYT TAFVYDSLNN PVQVTDAAGY
VTDYTYDERG NLLSVSKAVY GGTVITSFSY DQFGQAINIT DPNDNSTSVT YDVYGNRTSV
TGPLGNTTTY TYDIIGRKIT KTGPRGNEPD ANPELHCYSY TYDQAGNVLT VTDPLGNVTT
NTYDANNNLI STTDPNGNTT TFTYNENSKL VTETDPHGNT TTYQYDTNGN LSSITDANGH
ITSYQYDALD RFVSTMYPDG NTENLTLDGN GNVLARTNSK GNTTNYQYDE LNRLIKITDP
AGGSIAMQYD PLGNQTGVTD QRGNTTTYTY DQASKLLSVT DSLDNTTSYT YDPVGNRLTE
TNPKGATWIY TYDAANRPVK TTGPLGHDSS VQYDSAGNVI TSTNTNEAST SFSYDALNRL
LSVTDTLDNT TDYTYDGNHN LTGVTDANEH TTNYTFDSMN RLVAITNPLG QTTNYSYDPV
GNRVTRTKPD GNSINYSYDS NNRLVEITYP DSNQVSFNYD ANGNRTAMTD PKGTTVYSYD
NLDRLTSVTR AVYSIDYNYD LAGNITGITY PDGLNISYTY NRLNQLQSVS DIVYTATFTY
DELGNIIGEE LPNGITVSYQ YDDNGRLTSL QHVNGDTVLT GVEYTLDNVG NRLSVTDENG
QTTSYTYDNL NQLTKVKYLD DNPVTYTYDP VGNRLSAGGV NYTYDSVNRL IQKGGIPYGY
NANGNLVSVG ESVYYDYDYE DRLVRFNDGN NTYRYTYDGD GNRLTQTVSG VVYGSYSYIY
DINAGLPLLL VEKDSEGNTN NYLYANGLYG RTGPEGRLFH HADGLGSVSV VSDVYGEELN
RYTYDPFGNP LTVNETVDNM FRFTGEPYDP SGLVFLRARY YDPSTGRFLT QDIYSGELNT
PLSQNLYIYC SNNPVVYIDP SGNIKICQLD DLGKGLWDSG GEAVRELMSS PGALWELSKA
IYRNELSKED LILALGSAGA DIAGTINYVW KHSDSVWVGN PSDKEVYEYG RNLGDVLQIA
AGSGAALKAI SKVAPKAAGA LGKGTSKSIL KEASQSAFKA ADNVSDFSVS NKHLMDAGGR
WQKFATTDKG QVNTWVQEGL RSGNAQFLPN NQEASYKIIT DLGKTIGTKG ETKIQVIIGA
DGKIWTAYPV K
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