| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2746 |
|---|
| Symbol | |
|---|
| ID | 8429732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2901535 |
|---|
| End bp | 2902401 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645035020 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_003192147 |
|---|
| Protein GI | 258515925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0290691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.306598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTC TAAACATTAC CGGAGCTACA AAGATATGCG GGATTATAGG TGACCCGATA
GAGCACTCCT TTTCTCCTTT TATGCATAAT GCTGCTTTTG CTGCTTTAGG TTTAGATTAT
GCTTATGTTC CTTTTCATGT AAAAAGAGAT AATTTGTCCG ATGCTCTAAA GGCAGTAAGG
GCTTTAAATA TAAAGGGAAT TAATGTTACT GTGCCTCATA AGCAAGCAGT TTTGCAGTAT
TTGGATGAAA TTTCATCATC TGCCTCTCTT ATTGGTGCAG TTAATACCGT TGTTAATAAT
CATGGGTATT TAGTTGGTTA CAATACTGAC GCTCCCGGCT TTGTCCGATC TTTGAAGGAA
CAGGCGGGAT TTTCACCGGA AGGAGCCGGC ATATTTATTC TGGGAGCCGG TGGTGCTGCA
CGTGCAGTTG CAGTTGAGTT GGCGTTGTCT GGGGCCTCCT TAATTCATAT AGCTAACCGA
ACAGTTGATC GTGCGGAGGA AATTGCCGGG TTAATTGAAG GAAATACAAG CTGTTCCTCA
AAAGCTTATT CACAGCAAGA TTTATCTCTA AGCAAATTAA TGAAAGACGC TGATTTAATA
ATCCAGACTA CTTCTCAAGG CATGTATCCG CGGGTAACGG AGCTGCCGGC TTATCCTCTG
GATGCATTTC ATGCCGGGCA GTTGGTGTGT GATTTGATAT ATAATCCAAG GCAAACTATA
TTTTTGCAGA TGGCGGAACA GTGTGGTGCT AAGACTTTAA ACGGCATGGG TATGCTTTTA
TACCAGGGGG CTCTAGCCTT TGAATACTGG ACGGGTTTGG CTTCTCCGGT GGAAATAATG
GATCAAGCTT TAAGGCAGGT GATATAG
|
|---|
| Protein sequence | MPFLNITGAT KICGIIGDPI EHSFSPFMHN AAFAALGLDY AYVPFHVKRD NLSDALKAVR
ALNIKGINVT VPHKQAVLQY LDEISSSASL IGAVNTVVNN HGYLVGYNTD APGFVRSLKE
QAGFSPEGAG IFILGAGGAA RAVAVELALS GASLIHIANR TVDRAEEIAG LIEGNTSCSS
KAYSQQDLSL SKLMKDADLI IQTTSQGMYP RVTELPAYPL DAFHAGQLVC DLIYNPRQTI
FLQMAEQCGA KTLNGMGMLL YQGALAFEYW TGLASPVEIM DQALRQVI
|
|---|
| |