| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2625 |
|---|
| Symbol | |
|---|
| ID | 8429611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2780028 |
|---|
| End bp | 2780741 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645034912 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003192039 |
|---|
| Protein GI | 258515817 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000254862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGGGC AGGAAAGAAT TCTTGTGGTG GAGGATGAAG ACTCCATCCG CCAGTTTATT
ACCATTAACC TGGAGAGAAA TTCATTTCAG GTTATGGAGG CCGTCAGCGG GAAAGAAGCC
CTGACCAGGT CGAAGACATT TCGCCCTCAC CTGATGGTGC TGGACATCAT GCTGCCTGGT
ATGGACGGCC TTGAGGTTTG CCGCCGGCTG CGGGTCGAGT CTCCCGGCAT AGCGGTGATT
ATGCTGACAG CCCGGGGGCA GGATATAGAT AAAGTAATGG GGCTGGAATT GGGAGCGGAC
GATTATGTGG TGAAACCATT CAATCCCCTG GAACTGGTGG CCAGGATTCG GGCCGTTCTC
AGGCGGATGC AAACAGATCG ACCGGATAAC AGTCAAATTA TATGCCAAGG CCTCTTTCGT
CTTGATGACA GGGCTCAGCT GATTTGCAAA AATGATCAGG AATTGGATCT GACTCCCCGA
GAGTATTGCC TGATGAAGAT TTTTCTGGAA AACAGCAACC GGGCCTTGAG CCGTGACTGG
CTGTTGAATC TGGCCTGGGG AGAGGACTTC GTCGGTGATC CTAAGACTGT AGACGTACAT
ATCAGGAGGT TGCGGGAAAA AATTGAGGAC AACCCTTCCA AACCGGTTTA TATTGAAACC
GTTTGGGGAG TTGGTTATCG CTGGCGGGAG GAGGGCAAAG TTGCAGGGCA TTAA
|
|---|
| Protein sequence | MKGQERILVV EDEDSIRQFI TINLERNSFQ VMEAVSGKEA LTRSKTFRPH LMVLDIMLPG
MDGLEVCRRL RVESPGIAVI MLTARGQDID KVMGLELGAD DYVVKPFNPL ELVARIRAVL
RRMQTDRPDN SQIICQGLFR LDDRAQLICK NDQELDLTPR EYCLMKIFLE NSNRALSRDW
LLNLAWGEDF VGDPKTVDVH IRRLREKIED NPSKPVYIET VWGVGYRWRE EGKVAGH
|
|---|
| |