Gene Dtox_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2615 
Symbol 
ID8429601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2767395 
End bp2769083 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content39% 
IMG OID645034903 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003192030 
Protein GI258515808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC TTAGTATTAT ATTTTCTCAT ATTTTATATT CTTCATTGAT TTCTAGCATC 
ATAATCGTAC TGTTATTGAT TGTCAAGAAG TGTTTACCTA GTTACCTGTC CGGCAGAGTA
TATCATGTGA TGTGGCTTCT CGTTTTACTC AGACTTATGG TGCCTTTCGA AATTGAAAGC
CCATATAGTT TAACCAGTAT TCTTCCCGAA ATATACCCAT TATTTAATTA TTCCCATGAG
TATATGAGTA ATCAAGCAGA TGATTACTTC AGAACAGGAA ATTTGAATAG CAATGAGTTT
CAAGAATTAG ATGGAGAATA CTACGACAAA GAGAAAACTA GAGATTATTC CCTCTGGAAC
CTGGGCCTTC TCAGTATAGT TTGGCTTACC GGGGTTACGT CTATAGCCTT GTTCGCTTCG
ATTATGCTCA TAAAATTTAA ACGACGGAGT AAAGAATTTG AAAGAGATTA TAACCCTCAG
ATTACTGAAC TAATGCAACA ATGTTGTGTA AGATTAGGGC TCAAAAAGGA TATTCCCCTT
TATTTGGATT CATATTTTCG TGGTCCCTGT ATAGCCGGTA TATTTAGTCC AAGTATCTAT
TTGCCCAAAG ATATTTGCAG CCAAATACAT CATCATCAGT TGGAACACGT ACTGCTACAT
GAACTGGCTC ATTATAAGAG AAAGGATCTC ATCTACAATT CGTGCGCAGC AATGGCCGCC
ATACTGCACT GGTTTAATCC TCTCGTATGG CTGGCAATTA GGGAGATGAG ATATGACAGG
GAGATTGCTA CGGATGCTTA TGTAATGGAA ACATTGGGCG AGTCCGCAGT AATCCCTTAC
GGAAATACAC TTCTTAAACT GGCCGGTATA TTCTCTAATC GTTCCACACC ATCAATCCTG
GCTGGTTTTA ATGAAACTAA TAAGCAGATG GAGAGGAGAA TCACCATGAT AAAAATGTTT
AGGAAAGGCT CCTACAAACT GTCGGCCCTT GCTATCCTGA GCTTTATCAT TATCGGAGCT
CTAGCTTTTA CCATTGCAAA TGGCAGTACT CTTAAAGGTG ATGGAAACAG CATGTTTAAT
GAAAATATAA AGGATATGAT GGTAGTTATT GATCCCGGTC ATGGCGGAAA TGATTGGGGA
GGTACATATC CCTTTGACAC TTCTGATCCT GAATCAATAG AGATTAAAGA AAAGGATTTT
AATCTGGAAA TATCGCTTCT GCTATCTGAT TTGTTGAAAA AATCAGGCAT AAAGGTTGTG
ATGACCCGTC AGGATGACAG AACAGTGGAA CTGGAAAAGC GGGTGGAGTT TGCAAATAGC
TGTAAAGCCG CCTTGTTAGT CAGTATTCAT AATGATATGC ATCCTGATAG TGCAATAAAT
GGAACCAAAA CTCAATATTA TTACTCTGGT AATGAAGCCG GTTATGGGAT TACCGGAGAA
AAAGCAGCGC AAATTATCCA ATCGAATCTG GTGGAAAAAC TTGGTACAAT AGACCTGGGA
ATAAGTAATG CCAGATTTAA GATACTGGAA CAGGTGAACA TGCCTGCAGT TTTAACCCAA
GTAGCTTATA TCACCAACAA ATCAGACCGA GAAAAGCTTA TGACAAGAGA ATTCAGAGTC
AAAACAGCGC AAGCGATATA TGATGGAATA ATAGAAGTGC TAAATGAAAT GGACGCAACG
GATAAGTGA
 
Protein sequence
MEMLSIIFSH ILYSSLISSI IIVLLLIVKK CLPSYLSGRV YHVMWLLVLL RLMVPFEIES 
PYSLTSILPE IYPLFNYSHE YMSNQADDYF RTGNLNSNEF QELDGEYYDK EKTRDYSLWN
LGLLSIVWLT GVTSIALFAS IMLIKFKRRS KEFERDYNPQ ITELMQQCCV RLGLKKDIPL
YLDSYFRGPC IAGIFSPSIY LPKDICSQIH HHQLEHVLLH ELAHYKRKDL IYNSCAAMAA
ILHWFNPLVW LAIREMRYDR EIATDAYVME TLGESAVIPY GNTLLKLAGI FSNRSTPSIL
AGFNETNKQM ERRITMIKMF RKGSYKLSAL AILSFIIIGA LAFTIANGST LKGDGNSMFN
ENIKDMMVVI DPGHGGNDWG GTYPFDTSDP ESIEIKEKDF NLEISLLLSD LLKKSGIKVV
MTRQDDRTVE LEKRVEFANS CKAALLVSIH NDMHPDSAIN GTKTQYYYSG NEAGYGITGE
KAAQIIQSNL VEKLGTIDLG ISNARFKILE QVNMPAVLTQ VAYITNKSDR EKLMTREFRV
KTAQAIYDGI IEVLNEMDAT DK