Gene Dtox_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2409 
Symbol 
ID8429394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2586174 
End bp2587319 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content40% 
IMG OID645034715 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003191843 
Protein GI258515621 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000897787 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.57122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGCT ATAAGAAATT AATTTTAGCT TTAGCTGCAG TTATTCTGTC GTTGACAAAC 
ACAAGTATTG CATACGCACA GGAACCGGTT TTATCGGCAG ATGCTGCTGT ATTAATGGAC
TCAGCTACAG GCCAAGTGTT TTTTGCTAAA GAGCCTGATA AGCGACGTTT TCCGGCCAGC
TTGACTAAAA TTATGACCGC ACTGGTAGCT CTGGAGAATG GTGATCCTAA TGATGTGGTT
AAAATAAGTA AAAAAGCGGC TTCAGTCAGT ATGGGTTCGG TTATTGACCT TAGAGCCGGT
GAGGAAATAA CTCTGGAAAA TCTGTTAAAA GCGGCACTTG TATGTTCGGC CAATGATTCT
ACTGTAGCTA TTGCCGAGCA TGTGGGGGGA AATGTAGAAA ATTTTTTGGT TATGATGAAT
GCAAGAGCTT TATCTGCGGG TGCGGTCAAT ACAAATTACG CTAATACTAA TGGCTACACT
CTTCCAAATC ACTATACTAC TGCCTATGAT CTGGCTCTAA TTGCCAGACA GGCTCTCCGG
AATAAGCAGT TTAACCGGCT GATCAGCATT AAAGAAACTA CCCTCAATTG GGAAGGCAAT
AAAAATCGCA CATTAGAAAT ACGCAATACT AATAGATTGC TTAGGGAAGG TTTTCCTGGT
ATTGACGGGG TAAAGACTGG TTCTACTCCC AGAGCAGGGG ATTGTTTAAT AGCCTCTGCG
AGCAGAAATG GCAGGCGGCT GATAGCAGTA GTGTTGCACA GTAATAACAG GTATACTGAT
GCTGCCAATA TTTTAAATTA CGGTTTTAAG GAGATTAAAA GCTATCAAGT TTTCAAAAAA
GGAGAGCAGG TAGTATCAGT GCCAGTTATG GAAGGGGTAT TAAAGGAAGT ACCGTTAATT
ACTCAATCTG GTTTACAGAT CGACATTACA GACGATAAGA TATCTTTGCT CAGGAAAAAA
TTTTTATTTA AAAATTCAGT AATGGCACCT GTCAAAAGTG GTCAGGTCCT TGGGGAAATT
ATTTGTTCCC TTGAAAACCG GGAAGTAGGC AGAATTTCTT TGGTTGCAGG GGATGACATA
GAAAGAAAGT CCTGGTTGAG GAGAAAATGG GAGAAATTAT CGGTTAGTTC AGGAATAAAT
AATTAA
 
Protein sequence
MFCYKKLILA LAAVILSLTN TSIAYAQEPV LSADAAVLMD SATGQVFFAK EPDKRRFPAS 
LTKIMTALVA LENGDPNDVV KISKKAASVS MGSVIDLRAG EEITLENLLK AALVCSANDS
TVAIAEHVGG NVENFLVMMN ARALSAGAVN TNYANTNGYT LPNHYTTAYD LALIARQALR
NKQFNRLISI KETTLNWEGN KNRTLEIRNT NRLLREGFPG IDGVKTGSTP RAGDCLIASA
SRNGRRLIAV VLHSNNRYTD AANILNYGFK EIKSYQVFKK GEQVVSVPVM EGVLKEVPLI
TQSGLQIDIT DDKISLLRKK FLFKNSVMAP VKSGQVLGEI ICSLENREVG RISLVAGDDI
ERKSWLRRKW EKLSVSSGIN N