Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2401 |
Symbol | thrS |
ID | 8429385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2577046 |
End bp | 2578950 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645034706 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_003191835 |
Protein GI | 258515613 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.162517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.284009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAGG TTAGTCTGAA AGATGGTTCA ACCAGGGAGT ATGAGCCAGG TATCACGATT ATACAAGTAG CTGAAGATAT TAGCCCTGGT TTGGCCAGGT CAGCTTTAGC AGGTAAAATA AACGGTAAAG CTGTGGATTT AAGCACTGCT CTTGAAGATA ATGTCTCTTT GGAAATTCTT ACTTTTAATG ACCCGGAAGG ACAGGAGATT TATCGCCACA GCAGCTCGCA TGTGTTGGCA CAGGCGGTTC AACGCCTGTT TCCCGGAACT AAACTGGCCA TTGGGCCGGC TATTAAAGAT GGTTTTTATT ATGATTTCGA TTCTGAACAT AAATTTACCC CGGCTGATAT GGAGAAAATT GAAGCCGAGA TGAATAAGAT TATTAAAGAA AACCAGCCCT TTAAACGCTT TGAGTTGTCC CGCGCAGAGG CCATAGATAA ATTTACGGAC CTAGATGAAA AATATAAAGT AGAGCTAATT AATGACTTGC CGGGAGATGC TGTAATTTCC TGCTATGAAC AAGGCGGCTG GTGTGATCTG TGCGCAGGTC CGCATGTTCC CTCAACAGGC AGCTTGAAGG CAGTCAAACT TACGAGTCTG GCCGGTGCTT ACTGGCGAGG CAGCGAGAAG AACAAAATGC TGCAGCGGTT TTACGGTACC TCATTTCCCA AAAAAGCTCT GCTGGATGAG CATATTAACA GGATTGAAGA GGCTAAACGC AGAGATCACC GTAAGCTGGG CGCTGAATTG GAATTATTCA GTGTAATGGA AGAAGGTCCC GGGTTCCCGT TTTTTCATCC CAAGGGTATG ATTTTGCGCA ATGAATTAGA AAAATTCTGG CGACAGGAGC ATGAAAAAAG AGGTTACCAG GAGATACGCA CCCCAATTAT TCTGAACAGA GTTCTCTGGG AGCAGTCCGG CCACTGGGAT CATTACAAGG AGAATATGTA TTTTACCCAA ATAGACAATT TTGATTTTGC TGTAAAACCA ATGAACTGTC CCGGAAGTAT GCTGATTTAT AAATCTAAAT TGCACAGTTA TCGCGAGTTC CCAATCAGGA TGGGGGAACT TGGTTTGGTT CACCGCCATG AGCTGTCTGG TGTGCTGCAC GGCTTAATGC GGGTAAGGTG CTTTACTCAG GATGATGCGC ACATCTTTAT GCTGCCGGGG CAGGTTAAGG ACGAGATTAT TGGAGTTATT GATCTGGTCG ATGATTTCTA CAGTATATTC GGTTTCAAAT ACCATGTGGA GTTGTCTACT AAACCGGAGA AAGCCATGGG ATCTGATGAA GTCTGGGATA TGGCCACCAA TACTTTAAAA GAGGCTATTG AAGCAAAAGG TTTGGACTAT AAGGTTAATG AAGGCGATGG GGCCTTTTAC GGGCCGAAGA TTGATTTTCA TCTGGAAGAT TGTCTGGGAC GTACCTGGCA GTGCGGGACT ATACAATTGG ACTTTTTAAT GCCGGAAAAA TTCGATTTGA GCTATGTGGG AGAAGATGGC CAAAAGCACC GCCCGGTAAT GCTGCACAGA GTTGTTTTCG GCAGCATCGA ACGTTTTATA GGTATTCTGA CCGAGCATTT TGCCGGTGCT TTTCCGACCT GGTTGGCACC CGTTCAGGTC AGGGTATTGC CCATTACTGA TCGCCAGTCA GATTACGCTG TAAGAGTAGT GGATAGACTG AAAGAGACCG GTATAAGGGT GGAGCTTGAT CAACGCAATG AAAAGATAGG ATATAAAATA CGTGAGGCAC AGACCCAAAA AATACCCTAT ATGCTGGTAA TAGGTGATAA AGAGCTGGAA AAAGAATTGG TAGCTATACG CCACCGCTCA CAGGGTGATT TAGGAATAAG TACGCTGGAG GACTTCATTG ATAAATTGCA AGAGGAAATA AGGGATAAAA AATGA
|
Protein sequence | MIKVSLKDGS TREYEPGITI IQVAEDISPG LARSALAGKI NGKAVDLSTA LEDNVSLEIL TFNDPEGQEI YRHSSSHVLA QAVQRLFPGT KLAIGPAIKD GFYYDFDSEH KFTPADMEKI EAEMNKIIKE NQPFKRFELS RAEAIDKFTD LDEKYKVELI NDLPGDAVIS CYEQGGWCDL CAGPHVPSTG SLKAVKLTSL AGAYWRGSEK NKMLQRFYGT SFPKKALLDE HINRIEEAKR RDHRKLGAEL ELFSVMEEGP GFPFFHPKGM ILRNELEKFW RQEHEKRGYQ EIRTPIILNR VLWEQSGHWD HYKENMYFTQ IDNFDFAVKP MNCPGSMLIY KSKLHSYREF PIRMGELGLV HRHELSGVLH GLMRVRCFTQ DDAHIFMLPG QVKDEIIGVI DLVDDFYSIF GFKYHVELST KPEKAMGSDE VWDMATNTLK EAIEAKGLDY KVNEGDGAFY GPKIDFHLED CLGRTWQCGT IQLDFLMPEK FDLSYVGEDG QKHRPVMLHR VVFGSIERFI GILTEHFAGA FPTWLAPVQV RVLPITDRQS DYAVRVVDRL KETGIRVELD QRNEKIGYKI REAQTQKIPY MLVIGDKELE KELVAIRHRS QGDLGISTLE DFIDKLQEEI RDKK
|
| |