| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2400 |
|---|
| Symbol | |
|---|
| ID | 8429384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2576327 |
|---|
| End bp | 2576821 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645034705 |
|---|
| Product | translation initiation factor IF-3 |
|---|
| Protein accession | YP_003191834 |
|---|
| Protein GI | 258515612 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00646191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.390668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAATT CTATACGGGT AAGAGAAGTT AGGGTAGTAG ATGCCAATGG AAATCAGTTA
GGGATAATGG CTACCCGTGA TGCTATGAGG CTGGCTGAAG AGAAGCAGTT GGAACTGGTA
GAAATAGCTC CACAGGCCAA GCCACCTGTA TGCCGTATTA TGGATTACGG CAAGTATAAG
TATGAGCAGA GCAAGCGGGA AAAAGAGACC AGAAAGAAAC AACGTATAAT TTCTGTAAAG
GAAGTCAAAT TGCGACCCAA TATTGAGGAA CATGATTTTG AAGTTAAAGC TAAAAATGCT
GTCCGCTTCT TGAAGGACGG GGATAAAGTT AAGGTAACAA TCATGTTCCG CGGTAGAGAA
ATTGTGCATA CTAATTTAGG CCAACAGTTG CTGGTTAAAA TGGCCGAACA GGTTAAGGAC
ATAGCTACTG TGGAAAGGCA TCCAAAACTC GAAGGAAAAA ACATGATAAT GATTTTAGCA
CCAAAACAAG AATAG
|
|---|
| Protein sequence | MNNSIRVREV RVVDANGNQL GIMATRDAMR LAEEKQLELV EIAPQAKPPV CRIMDYGKYK
YEQSKREKET RKKQRIISVK EVKLRPNIEE HDFEVKAKNA VRFLKDGDKV KVTIMFRGRE
IVHTNLGQQL LVKMAEQVKD IATVERHPKL EGKNMIMILA PKQE
|
|---|
| |