| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2363 |
|---|
| Symbol | |
|---|
| ID | 8429347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2537552 |
|---|
| End bp | 2538469 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645034668 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_003191797 |
|---|
| Protein GI | 258515575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TTAATCATTA TGCAGATCCG GAAATAGGAC AGAGACTTGA TGTCTATCTC
AGTAATTGTT ATCCTGACAT AAGCCGTTCC CAACTTCAAA GATTAATTGC CCAGGGACTG
GTAGAAATAA ACGGGAAAAA AGTCGCGGCC AAATATAAGA TCAAACCAGG TGACTATATT
AATTTAACTA TACCCGATCC CGTGGGTGTT TCTGTTGAGG CGGAAAATAT TGCACTTGAT
ATCTATTTTG AAGATGAAGA TGTTATTGTG ATAAATAAAC CCAGAGGAAT GGTAGTTCAT
CCCGCTGAGG GAAATTACAC CGGAACGATG GTCAACGCTC TCTTATATCA TTGTCGCGAT
TTGTCAGGTA TCAACGGTGT GTTGAGACCC GGTATTGTAC ATAGATTAGA TAAAGATACC
TCCGGACTTT TAATGGTAGC TAAAAATGAT TTGGCTCATA ACAATCTGGC TGCCCAGTTA
GAAAAAAGAC TGGTAAACCG GCGTTATTTA GCTTTAGTCC ACGGAAATTT GAAACAAGAT
GCTGGAACTG TTGATGCTCC CATTGGCAGA GATGCCTGTA GCAGACAAAA AATGGCTGTG
ACAGACAGGA ATTCACGTTC TGCGGTAACA CATTTTAAAG TCTTAAAGCG TTTTGGCCGT
TATACCTTGC TTGAATTGAA GCTGGAAACA GGTCGTACAC ACCAAATTAG AGTTCACATG
AAATATATTG GTTACCAGGT TGTAGGCGAC CCTAAATACG GTCCGTCTAA ACCTCATTTC
AATCTGGACG GGCAGTTCCT GCATGCCTGT TTGTTAGGCT TTGCTCATCC GCGTACGGGA
AAATATTTAG AGTTTAATGC ACCTTTGCCG GATATTTTGG TTAAAGTATT AGCTGAGCTG
GAAAACCAGG TTATATAA
|
|---|
| Protein sequence | MKTINHYADP EIGQRLDVYL SNCYPDISRS QLQRLIAQGL VEINGKKVAA KYKIKPGDYI
NLTIPDPVGV SVEAENIALD IYFEDEDVIV INKPRGMVVH PAEGNYTGTM VNALLYHCRD
LSGINGVLRP GIVHRLDKDT SGLLMVAKND LAHNNLAAQL EKRLVNRRYL ALVHGNLKQD
AGTVDAPIGR DACSRQKMAV TDRNSRSAVT HFKVLKRFGR YTLLELKLET GRTHQIRVHM
KYIGYQVVGD PKYGPSKPHF NLDGQFLHAC LLGFAHPRTG KYLEFNAPLP DILVKVLAEL
ENQVI
|
|---|
| |