| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2358 |
|---|
| Symbol | |
|---|
| ID | 8429342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2530981 |
|---|
| End bp | 2532300 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645034663 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003191792 |
|---|
| Protein GI | 258515570 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GCGGAAGTAT AGCCCTGGCT TCTCTAGCCG GTGTGGCACT GGTTATGGTA
CTGGGAAATT CCATGCTCAT ACCGGTTCTC CCGGCCATCA AAACTTCATT AGCTCTATCT
CAGTTCAAGG TCAGCCTGAT CATATCAGTG TTCTCTTTTT CTGCCGGATT AATCATCCCG
GTTGCCGGTT TCCTTTCTGA TCGCTTCGGG CGAAAGAAAA TTATCGTACC GGCACTCTTA
CTATATGGTC TGGGTGGTGT AATAGCAGGT CTGGCAGCAA TACTGCTGAA ACAAAGTTCT
TATTATATTA TACTGGCCGG GCGAATCATG CAGGGTATTG GGGCAGCAGG CACTTCTTCT
ATTGCTATGG CCTTATGCGG AGACTTGTAT AAAGGTTCGG AACGCAGCAA ATCGCTGGGT
ATAATTGAGT CCGCCAACGG TCTGGGCAAA GTTATAAGTC CCATTCTGGG TTCTCTGGTG
GGACTTATAG CCTGGTACGC GACACTGCTT TTTTTTCCTC TCATCGCAGT ACCTATTGCA
GCGGCAGTAT GGTTTTTAGT AAAAGAACCG GAAGGAAATA CCTCAAATGA GCCAATGCGC
AAGTATTTGC AGGACTTTGC CAAAATATTT AAAAATAGTT ACCCTATGCT GCTGTCAGCC
TTTTTTGCCG GAGCAGCCGC CCTGCTGGTT CTGTTCGGCG TGCTTTTTTT CCTGTCCGAC
TACCTGGAAA ACACTTATGG ACTTAAAGGG GTTTCTAAAG GAGGAGCTTT AGCTATTCCG
GTGCTCTTCA TGAGTGCGAC TTCTTATATA ACTGGTTTAA GCATCAAAAA GAATTTTGGC
TTAATGAAAA CCTTGATTGT CACCGGGCTG TTTCTTACCG GTGCCGCCCT TTCAGTTTTG
CCGTTATTTC ATAATACCTA TATATTCTTT ATAGCTATCT CTCTGGCCGG AATTGGCAGC
GGTTTGGTTC TGCCCTGTCT AAATACTTTC ATTACCAGTT CTGCCGGTTC TGAAGAAAGG
GGTCTGTTAA CTTCTTTTTA CGGAAGCGTG CGTTTTTTCG GCGTTGCTGC AGGACCGCCG
CTTTTCGGTC TGCTCATGGG TATCAGCTGG AAGGTTATGT TTTGGAGTTC CTCAGCTATA
TCAGCATCAG CAGCAGTTTT AGCACTTCTC TTTATAAAAC CCGTTCAAAA TAAATCTGCA
AAAAAAGAGG GCGATAAACC GCCCATAGAT ATCCAAACAG TACAGGTTAA AACACCGCAA
CAAATATTTG TTCTGAATAA GCCTGTCAAT AAACCTCTAA ATAATAAAAA GGATACTTGA
|
|---|
| Protein sequence | MKKGGSIALA SLAGVALVMV LGNSMLIPVL PAIKTSLALS QFKVSLIISV FSFSAGLIIP
VAGFLSDRFG RKKIIVPALL LYGLGGVIAG LAAILLKQSS YYIILAGRIM QGIGAAGTSS
IAMALCGDLY KGSERSKSLG IIESANGLGK VISPILGSLV GLIAWYATLL FFPLIAVPIA
AAVWFLVKEP EGNTSNEPMR KYLQDFAKIF KNSYPMLLSA FFAGAAALLV LFGVLFFLSD
YLENTYGLKG VSKGGALAIP VLFMSATSYI TGLSIKKNFG LMKTLIVTGL FLTGAALSVL
PLFHNTYIFF IAISLAGIGS GLVLPCLNTF ITSSAGSEER GLLTSFYGSV RFFGVAAGPP
LFGLLMGISW KVMFWSSSAI SASAAVLALL FIKPVQNKSA KKEGDKPPID IQTVQVKTPQ
QIFVLNKPVN KPLNNKKDT
|
|---|
| |