Gene Dtox_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2332 
Symbol 
ID8429316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2504883 
End bp2506670 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content41% 
IMG OID645034639 
ProductFibronectin-binding A domain protein 
Protein accessionYP_003191768 
Protein GI258515546 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0124404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG ACGGCTTAGT TTTAGCTGCA GTAAAGCAGG AATTGGATGT ATTAACAGGC 
GGGAGAATTG AACGTATTTA TCAGCCTTCT AAAGATGAAG TAGTGCTCAG TATTCACCGT
CCCGGAAGCA AACAGCGTTT AGTGCTCTCT GCTCACGCCT ATAAAACAAG GATACATACT
ACCTCTCATA CGAAAGAGAA TCCCTTAAAC GCCCCCTTAT TCTGTATGGT TTTACGAAAA
CACCTGGAAG GAGGGCGTAT CTGCGGGTTC TCTCAACCTG GTCTGGATAG GGTTTTGATT
ATTGATATCG AAGCCAGGGA TGAATTAGGT CAAATGACCA GCAAGCATTT AATCTGCGAA
ATTATGGGCA AACACAGCAA TATTATTCTG GTTGATAAAG AGCGGAATAC CATAATTGAC
GGTATAAAAC GTTATTCGCA CAATGTAAGC CGTTACCGCG AGGTACTGCC TGGCAGGGTT
TACCTGCCTC CCCCGGAACA GAATAAGCAA AACCCCCTGC TTTTAAATGA AGATTCCTTC
CGGAAGTACC TGCTGGCAGG CTCTTTAGAG GCCAAAGTCA CCAACATATT GCAAAAGTCT
TTTGACGGCT TAAGCCCACT GATTTGCCGC GAGATAATAT ACCGTTCCGG CCTAGACGCT
GATTTAATTC TTGATCACTG TGGTGAACAT GAATTAAGAC TGCTTTGGCA ATCCTTAGCA
GCAATAACTG AAAATGCGCG TAAAGGCGTC TATTATCCTG TCATTTTATT TGACCGTTCA
GGTTTGCCGG TTGATTATGC TGCCTTTGAT ATCAGTCATC TGGAAGGTCT ATCCAAACAA
ACCTCTGCTA TGTGCTCAAT ACTTGATCAG TATTATACCG CAGTTTATAG TTTAGATTTG
GTTAACGGTC AAAAACAAGC TTTAAACCAG ATTGTGAATA AAGAAATGAA ACGCCTGCAG
AAAAAAATAG ATATTTATCA GCAGAACTTA GTAGATGCAG AAGAAGCCGA AATATATAAG
CTTTACGGTG AATTGTTAAC AGCTAATTTA TACCGCGTAT CTTCTAAGGA TACAGATGTT
GAATTAGAAA ATTTTTACCG GCCCGGTGAA ACTGTTGTAG TCAAGCTTGA TAGCAGGCTT
TCTCCGTCAG AAAACGCACA GAGTTATTTT AAAAAATATC TTAAATCTAA AAACACAAAG
CTCTCGGCAG AAGAACTTTC CAAACAGGCG CATTCTGACT TGGCTTACCT GGAAAGTGTG
GAGACAGCTA TTGCGCAGGC GGTAACAACA GCAGAAATGG CTGAAATAAA ACTGGAACTG
GTAGAAGAGG GTCTGCTCAA GGAAACTTCC CGGCGGATTA ATCATAAAAA AGTGAAAAAA
GATAAAAAAG ACAGGAATAA ACCTCGCCCC ATGAGTTTTT GCTCAACTGA TGGCATACAG
ATACTGGTCG GAAAGAATAA CAAGCAAAAT GATTACCTGA CCATGAAAAT TGCTTCCGAG
AAAGATATTT GGCTGCATAC TAAGGATATA CCTGGTTCTC ACGTAATTAT CCGAACAGAG
GGCAAGGAGG TATCCGAAAA TACACTGCTT GAGGCGGCAA GTTTGGCTGC CTATTTCAGT
AAAGCCCGTA ATTTAGCTAA GGTTCCGGTA GACTATACAG CAAGAAAATT TGTGCATAAG
CCTAACGGCG CAAAACCCGG CTATGTTATA TATGATAAGC AAAAGACTTT ATTGGTTGCG
CCTAATGAAG AATTATTGGA AAATCTGACA GCACAAAAAC CCCTTTAA
 
Protein sequence
MPFDGLVLAA VKQELDVLTG GRIERIYQPS KDEVVLSIHR PGSKQRLVLS AHAYKTRIHT 
TSHTKENPLN APLFCMVLRK HLEGGRICGF SQPGLDRVLI IDIEARDELG QMTSKHLICE
IMGKHSNIIL VDKERNTIID GIKRYSHNVS RYREVLPGRV YLPPPEQNKQ NPLLLNEDSF
RKYLLAGSLE AKVTNILQKS FDGLSPLICR EIIYRSGLDA DLILDHCGEH ELRLLWQSLA
AITENARKGV YYPVILFDRS GLPVDYAAFD ISHLEGLSKQ TSAMCSILDQ YYTAVYSLDL
VNGQKQALNQ IVNKEMKRLQ KKIDIYQQNL VDAEEAEIYK LYGELLTANL YRVSSKDTDV
ELENFYRPGE TVVVKLDSRL SPSENAQSYF KKYLKSKNTK LSAEELSKQA HSDLAYLESV
ETAIAQAVTT AEMAEIKLEL VEEGLLKETS RRINHKKVKK DKKDRNKPRP MSFCSTDGIQ
ILVGKNNKQN DYLTMKIASE KDIWLHTKDI PGSHVIIRTE GKEVSENTLL EAASLAAYFS
KARNLAKVPV DYTARKFVHK PNGAKPGYVI YDKQKTLLVA PNEELLENLT AQKPL