| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2300 |
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| Symbol | |
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| ID | 8429284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 2467660 |
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| End bp | 2468763 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645034607 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003191736 |
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| Protein GI | 258515514 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000573561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAAC AGTATATGAA AATGGCTCTG GATTTAGCAG CCAGGGCCAG AGGAAGGACA
AGTCCCAATC CTATGGTAGG CTCTGTTATA GTTAAAAACG GAGCAGTAGT TGGCAGAGGC
TATCATAAGA AGGCCGGTAC GCCTCACGCG GAAATACACG CCTTGAAGGA AGCCGGCGAG
GCTGCCAGAG GAGCTACTAT TTATGTCACC TTAGAGCCCT GCTGCCACCA TGGCCGTACC
GGTCCTTGCA CCGAGGCCAT ATTGTCAGCG GGCATTAAAC GGGCAGTCGT TGCTATGACC
GATCCCAATC CTCTGGTAGC CGGAAAAGGA CTGGACATAC TAAGAAAGGC GGGCGTGGAG
GTAGTATCCG GACTGTTGGC AGAAGAAGCC GCTAAATTAA ACGAGGTATT TATTAAATAC
GTAAGTACCG GAATGCCTTT TGTGCTGTTA AAAACAGCTA TGAGCCTGGA TGGCAAAATT
GCCGCTTATA CCGGTCATTC CCGGTGGATT ACGGGATCGG CTTCACGTGC TTACGTTCAC
CACCTGCGTG ACAGCTATGA TGCCATATTA ATTGGCATAG GAACTTTAAT GGCAGACAAC
CCTTCTCTGA CTGCAAGACT CTCCTGCCCG GAAGATGGAG TTAAAGGAAA AGATCCTGTG
CGTGTAATAG TTGACAGCCT GGCCCGTACA CCTCCTGAGG CTAAAGTTTT GACTCAAATC
TCTGCCGCTC CGACTATTAT TGCAATAACA GCTGCAGCAC CCGAAGAAAG AGTGCAAAAG
CTTGTTGCTG CGGGAGCACA AATAATCATT GCCGGAAACG GGCCTAAGAT CGATTTGCCA
TACTTATTTA AGTCCCTGAC CGCTATTGAT ATAACCAGTA TATTAATTGA AGGCGGTGCT
GCGGTAAATG CTTCTGTTTT GGAACAAAAA CTGGCAGATA AGCTTTTGTG GTTTATAGCT
CCTAAGATCA TCGGCGGTAA AGAGGCACCC GGCCCGGTGG GAGGGCGAGG AGTTGCGGCA
GTCAGTGAAG CGCTGCTGCT GGAGCGCATA TCTGTTCAGC GTTTCGAAGA GGATATTTGC
CTGGAGGGTT ACCTCAGAAA ATAA
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| Protein sequence | MDEQYMKMAL DLAARARGRT SPNPMVGSVI VKNGAVVGRG YHKKAGTPHA EIHALKEAGE
AARGATIYVT LEPCCHHGRT GPCTEAILSA GIKRAVVAMT DPNPLVAGKG LDILRKAGVE
VVSGLLAEEA AKLNEVFIKY VSTGMPFVLL KTAMSLDGKI AAYTGHSRWI TGSASRAYVH
HLRDSYDAIL IGIGTLMADN PSLTARLSCP EDGVKGKDPV RVIVDSLART PPEAKVLTQI
SAAPTIIAIT AAAPEERVQK LVAAGAQIII AGNGPKIDLP YLFKSLTAID ITSILIEGGA
AVNASVLEQK LADKLLWFIA PKIIGGKEAP GPVGGRGVAA VSEALLLERI SVQRFEEDIC
LEGYLRK
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