Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2279 |
Symbol | aspS |
ID | 8429263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2446588 |
End bp | 2448414 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645034587 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_003191716 |
Protein GI | 258515494 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000116393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000131011 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGGAAG AAAAAACAGA ATCAAAACCT GGTTCTGTTG CAGCGGAAAA CATTAATGGC TTAAAGCGGA CTAATTACTG TGAAGACCTG AACAAACAGA TGGTGGGCCA GGCCGTAGTG CTAATGGGTT GGGTTAGTAA ACGCAGGGAT CACGGGGGAT TGATTTTCGT GGATCTGCGT GACAGAAGCG GTTTAGTGCA GCTTGTTTTC AGTCCTGATT TAGCTGTTGA TGCTTTTCAT AAAGCGGAGG CTATTCGCAA TGAATATGTG CTGGCTATAG CCGGTACAAT CCGTCCCAGG CCAGAGGGAA CGGAAAACTA CAACCTGGTT ACCGGTGAGA TAGAAGTTAT TTGCCATGAA TTGAGAATTT TAAATACTGC CAAAACACCG CCCTTTTACG TGGAGGACGG TATAGATGTA GATGAAAACC TAAGATTGCG TTATCGTTAT CTTGACCTGC GCCGCCCGGA AATGCAAAGG AGCATTTATT TAAGACATAA AACCAGTAAG GTTGCCAGGG ATTTTCTGGA CGAAAACGGT TTTTGGGAAA TTGAGACTCC TATGCTGACA AAAAGCACAC CGGAAGGGGC GCGTGATTAT TTAGTGCCAA GCCGTATAAA TCCCGGCAAA TTCTATGCAT TGCCTCAATC ACCGCAAATA TTTAAACAGA TTCTTATGGT TGCCGGTATG GAGAGGTATT TCCAGATCGT GCGTTGTTTC AGAGATGAGG ATTTGAGAGC GGACCGTCAG CCGGAGTTTA CGCAAATCGA TTTGGAAATG TCTTTTGTCG ATGTAGAAGA TGTTTTATTG CTTATGGAAA AACTGGTATC CCGGCTGTAT CTGGAGACAG CAGGTCTGGA TTTGATTTCT CCTTTTCCAC GACTTACCTA CCAGGAGGCT ATTGACCGCT TTGGTTCAGA TAAACCTGAT ACCCGCTTTG GACTGGAACT TTGTGATTTA TCCGATATAG CTTTAGGATG TGGTTTTAAA GTTTTTTCTG CGGCGGTTAA AAACGGCGGA CAAGTTAAAG GTATTAACGC TAAAGGTTGC GGCAGTCTTA GCCGCAAGGA AATAGATGAT TTGACAAAAT TTGCAGCAAT TTACAGAGCC AAAGGATTGG CTTACATTAT TGTCAGCGAT GAAGGTGTCA AATCCGTTAT TGCTAAATTT TTCACTGAAG AAGAATTGAA TACTATTGTC AGTCGCATGC GGGGCGAACC GGGAGATTTA TTGTTATTTG TGGCCGATAC CTCTGAAACG GTAGCAGGCG CGCTGGGAGC GCTTCGCTTG CATTTAGCTG AAATGCTAAA TATTATTCCT GAGAATTTGA ATAATTTTCT CTGGGTTACT GATTTTCCAC TTTTGGCCTA TGATCCGGAA GAAAAACGCT ATGCAGCCAT GCACCACCCC TTTACTGCTC CCAGGGATGA AGACATTGCA CTAATGGAAA CTGAGCCAGG CAAGGTAAGG GCAAAGGCCT ATGACCTGGT ATTAAACGGA GTTGAGGTTG GCGGAGGCAG TATTCGTATT CACCGTAGAG ATGTTCAGGA AAAAATGTTT GCGGCTATCG GCTTATCAGC AGAAGTGGCC AGGGAAAAGT TTGGTTATAT GCTGGAAGCT TTTGAGTTTG GAACACCCCC GCACGGTGGC TTTGCTTTTG GCTTTGATCG CCTGATTATG ATTTTAGCAG GTAAAAAATC CATCAGAGAT GTGATTGCTT TCCCCAAAAC TCAGAGTGCC ACTTGTTTAA TGACACAGGC ACCGTCTGAG GTTGAGGATA AGCAGCTAAA AGAATTGCAC ATAAAAATTG ATTTAAAGAG GGCATAA
|
Protein sequence | MSEEKTESKP GSVAAENING LKRTNYCEDL NKQMVGQAVV LMGWVSKRRD HGGLIFVDLR DRSGLVQLVF SPDLAVDAFH KAEAIRNEYV LAIAGTIRPR PEGTENYNLV TGEIEVICHE LRILNTAKTP PFYVEDGIDV DENLRLRYRY LDLRRPEMQR SIYLRHKTSK VARDFLDENG FWEIETPMLT KSTPEGARDY LVPSRINPGK FYALPQSPQI FKQILMVAGM ERYFQIVRCF RDEDLRADRQ PEFTQIDLEM SFVDVEDVLL LMEKLVSRLY LETAGLDLIS PFPRLTYQEA IDRFGSDKPD TRFGLELCDL SDIALGCGFK VFSAAVKNGG QVKGINAKGC GSLSRKEIDD LTKFAAIYRA KGLAYIIVSD EGVKSVIAKF FTEEELNTIV SRMRGEPGDL LLFVADTSET VAGALGALRL HLAEMLNIIP ENLNNFLWVT DFPLLAYDPE EKRYAAMHHP FTAPRDEDIA LMETEPGKVR AKAYDLVLNG VEVGGGSIRI HRRDVQEKMF AAIGLSAEVA REKFGYMLEA FEFGTPPHGG FAFGFDRLIM ILAGKKSIRD VIAFPKTQSA TCLMTQAPSE VEDKQLKELH IKIDLKRA
|
| |