Gene Dtox_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2272 
Symbol 
ID8429255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand- 
Start bp2441220 
End bp2442308 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content42% 
IMG OID645034579 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003191709 
Protein GI258515487 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.00000706888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGGGAA AAAAAGTTGT TGTTGCTATG AGCGGCGGCG TAGACAGTTC TGTCACCGCC 
GCCCTTTTAT TGGAGGAAGG TTATGAAATA ACCGGAGTGA CCATGCAAAT CTGGGATCCT 
GAGCAAAAAG ACGCCACCGG GGAGGAGGGC TGCTGCTCTC TTTCGGCTGT TGACGATGCC 
CGCAGGGTAG CCAATATATT AAACATACCC TATTATGTTT TAAATTTTCG CAAGCAATTT 
GAAAAATCAG TTATAGATTA TTTTTTAGCT GAATACCTTG AGGGGCGTAC GCCAAACCCT 
TGTATTGCCT GTAACCGTTA TGTAAAATTT ACAGCCCTGC TGCAGAAGGC CATATCTATA 
GGTGCCGATT TTATAGCTAC AGGACATTAT GCTCGTCTGG GCTATTCCAA GGAGTATAAC 
CGGTATATCA TTAAAAAATC AGCAGATATT AAAAAGGATC AAACCTATGT GTTATATAAT 
TTGACACAAA ACCAAATAGC TCATACTCTC ATGCCGTTGG GCGTTTATAC TAAAGAACAG 
GTACGGGAAA TGGCGTTAAA ATACTGTTTG CCTGTTGCCG CCAAACCGGA AAGCCAGGAA 
ATATGTTTTG TTCCTGATAA TGACTACCGG AGTTTTATCC AAAAGAAAAC AGATGCTGAG 
ATTAAGCCGG GATTGTTTCT GGATATACAG GGAAAAGTAA TTGGGGAGCA CAGGGGAATA 
CCTTATTATA CTTATGGACA GAGAAGAGGA CTTGGTATTG CCGCCGGTGA ACGCATGTAT 
GTAGTGGATA TTGATCCGGC CAGAAACACT GTTACCCTGG GCTATGAAGA GGATATTTTT 
ACACGGGAAT TAATATCCGG GCAAAATAAT TTTATAGCTA TTGATAAACT CATTGCTCCT 
ATGGAAGTAG AAGCCAAAAT AAGGTATAAT TCCAAGCCAT ACAAGGCAGT GATTTTTTCT 
GAAGGAGAAG ACCGGGTCAA AGTAGTTTTT GATGAGCCAC AGCGTTCGGT TACCCCGGGA 
CAAGCAGTTG TTTTTTATAG CGGTGATACC GTAATAGGCG GGGGCACCAT TTTGAAAAAG 
GAAAATTAA
 
Protein sequence
MKGKKVVVAM SGGVDSSVTA ALLLEEGYEI TGVTMQIWDP EQKDATGEEG CCSLSAVDDA 
RRVANILNIP YYVLNFRKQF EKSVIDYFLA EYLEGRTPNP CIACNRYVKF TALLQKAISI 
GADFIATGHY ARLGYSKEYN RYIIKKSADI KKDQTYVLYN LTQNQIAHTL MPLGVYTKEQ 
VREMALKYCL PVAAKPESQE ICFVPDNDYR SFIQKKTDAE IKPGLFLDIQ GKVIGEHRGI 
PYYTYGQRRG LGIAAGERMY VVDIDPARNT VTLGYEEDIF TRELISGQNN FIAIDKLIAP 
MEVEAKIRYN SKPYKAVIFS EGEDRVKVVF DEPQRSVTPG QAVVFYSGDT VIGGGTILKK 
EN