| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2249 |
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| Symbol | |
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| ID | 8429232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 2420235 |
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| End bp | 2421611 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645034556 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_003191686 |
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| Protein GI | 258515464 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.79134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00749966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGATA TACCCGTACC CGTGAAAGTT AATGATATAA TCGAATTGCA GATCAATGAT
ATTAATCATC AGGGAGCCGG AGTTGGTCGC TATCATGGCT TTGCCGTTTT TGTACCGTTT
ACCTGTGTAG GAGAAATAAT ACTGGCCACT ATTACTGAAA TAAAAAAGAG TTTTGCCGCA
GCGAGTCTTG TGAAAGTTTT AAAATCCTCT GACAACAGGC AAATTCATTC CTGTTCTGAG
TATATGAAAT GCGGTGGTTG CCAACTGCAG CATAGTAGTT ATGCCGAACA ATTAAAGCTA
AAAGAAAAAT TTGTTCGCGA CAATTTAAAA CGTATTAGCG GGCTTCCTGA TGCAGTGGTT
TTGCCAACTA TCGGTATGGA AAATCCCTGG AACTATCGTA ATAAAATTCA CCTGCATGCC
GGCAGAAAAA ATAACAGGAC TGTCCTGGGT TTTTTCTCCG AGGGTTCTCA CATACTGGTT
GAAGGTACAG CCTGCTGCCA GATAAATGAC GGTAGATTGA ATGAGATTAG TGCTATTCTG
GAGGATCTGA TAAACAAGTA TAAGCTTGAA CCATATAACA AGCACAGCAA AAAGGGTCTC
CTGCGGGGTG TGATGCTGCG CAAAGCTGAG GCTACCGGGC AGGTTATGCT TGTGCTGGTA
ACTGTGAGTG GTAATTTACC GGGCCAGTCA ACCTTCACTC GCGAATTAGT AAATCAATGC
CCTGATATAA CATCTATTAT CAGAAATATA AATAACGGAA ATAATAGCTT GCTGCTGGGA
AGCGTAAATA AACTAATCTG GGGAAAGGAA ATAATAGTTG ATAAAATAAA AGACCTGTCT
TTTTACATTT CAGCCAACTC GTTTTATCAA ATAAATCCAA AACAAACTAT TAAGCTTTAC
GATAAAGCTC TGGAGTATGC CGAATTAAAA GGTAATGAGA CGGTACTCGA TGCTTACTGT
GGAATAGGAA CCATAGCCAT GTATTTTTCA GCTAATGCCA GGAAGGTCAC AGGATTGGAA
TCACTCAACA TCGCGGTAAA GGATGCCAGG GAAAATGCGG CTTTAAATAG GTTAAATAAT
GTAGAGTTTT TGTGCGGTGA GGTTGAAAAA TTATTACCTG AATTCGCAGA ACGTAATAAT
AATGTTGACA TTATTATACT GGACCCGCCT CGTCAAGGCT GCAAGCAAGT TGTCCTTGAA
GCAATTGCAA AAATGAGGAT ACCTAAAATT ATCTATGTGT CTTGCAATCC CGGCACATTG
GCCAGGGATT TGGGTTTACT TGATAAACTT GGCTATGGGA TAATTGAAGT GCAGCCGGTG
GATATGTTTC CGCAGACGAG CCATATCGAA ATTTGTACAT TTTTGTCGAA AATATAA
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| Protein sequence | MADIPVPVKV NDIIELQIND INHQGAGVGR YHGFAVFVPF TCVGEIILAT ITEIKKSFAA
ASLVKVLKSS DNRQIHSCSE YMKCGGCQLQ HSSYAEQLKL KEKFVRDNLK RISGLPDAVV
LPTIGMENPW NYRNKIHLHA GRKNNRTVLG FFSEGSHILV EGTACCQIND GRLNEISAIL
EDLINKYKLE PYNKHSKKGL LRGVMLRKAE ATGQVMLVLV TVSGNLPGQS TFTRELVNQC
PDITSIIRNI NNGNNSLLLG SVNKLIWGKE IIVDKIKDLS FYISANSFYQ INPKQTIKLY
DKALEYAELK GNETVLDAYC GIGTIAMYFS ANARKVTGLE SLNIAVKDAR ENAALNRLNN
VEFLCGEVEK LLPEFAERNN NVDIIILDPP RQGCKQVVLE AIAKMRIPKI IYVSCNPGTL
ARDLGLLDKL GYGIIEVQPV DMFPQTSHIE ICTFLSKI
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