Gene Dtox_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2236 
Symbol 
ID8429219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2407186 
End bp2408478 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content41% 
IMG OID645034544 
ProductRecombinase 
Protein accessionYP_003191674 
Protein GI258515452 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000237941 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAAGAA CGTTTTTCTC TTTTCAAATT ATTTCGAGCA CTTTCATAAA CAATCACCCC 
GATTATGAGT TTGCCGGGAT TTTTGCCGAT GAGGGTATTT CAGGAACCAA TACTAAAAAG
AGAGAGCAGT TCAATAAACT GATTGAGGAC TGCAAGGCGG GAAAAATTGA TATGATTATT
ACTAAATCCA TATCAAGGTT TTCGAGAAAT ACTTTGGATT GTTTGAATTA TGTCCGTCAG
CTTAAAGACC TGGGGATTGG GGTTATTTTT GAAAAAGAGA ACATTAATAC CTTGGACGGA
AAGGGAGAAG TGCTTTTAAG CATTCTCAGC TCACTGGCCC AAGACGAATC TCGGTCGATC
TCGGAAAATT CAACCTGGGG AATCAGAAGG CGATTTGAAC AGGGCAAAGT AACAATCAAC
CATACAAAAT TCCTGGGATA TGATAAAGAT GAAGATGGCA ACCTTATCAT CAATGAAAAG
CAGGCCAAGA TTGTCAGAAG GATTTATACC GACTATCTGA ACGGTAAGGG GCCAAACGGG
ATCACCAGGG CGCTTGAGGC GGAGGGGGTT CCAAACTGGA ACGGCAAAGT TAAATGGTAT
GAAAGCAGCA TTAGGAAAAT GCTGAGTAAT GAAAAATATA AAGGAGACGC CCTACTGCAA
AAGACTTATA CAGTAGATTT TTTGACCAAG AAAAGAGTGG TGAACACCGG CCAGATTCCC
CGGTATTATG TAGAGGAAAG CCACCCGGCC ATTATTGATA AGGATATGTG GGAAGCGGTC
CAGCTTGAAA TGGAAAGACG GAGAGCTTTT GCAGAGAAAC ATGGTATTAA AAAAATTGAT
TATGCTACAG CGGATAATCC CTTTGCAGGC AGGGTGATAT GTGGTCATTG CGGCAGCCTT
TTTGGCAGAA AAGTTTGGAA CTCAACCGAT GAAAGGCTAA GAAGGATTGT CTGGCGATGC
AACGGCAAAT ATCCGGCGAA GGGGAAAAAG GGTTGCGAAA GCAGGCATAT TGACGACAGG
GTTTTGTATC AGGCTTTCGT TGATATATTT AATACGCTTG TCAAAAACAA GAATTACTTT
TTCGATAAGT GGAAAGGATT ACAGGAAAGC GATAATCCGC TTCGACGCTA CAAAGCAAAG
CAGTTTTCAA AAATCATAAC TGAGACAGGG CAGATCAAGG AATTTGATAT AGCCTTATAT
TTTGCGTTCA CGGAAAAAGT AGTATTATAT GATGAGGGCA GAGTGATAGT TGGTTTGCTT
GACGGAACAG AAGTCGAATG CATAATTGAA TAG
 
Protein sequence
MKRTFFSFQI ISSTFINNHP DYEFAGIFAD EGISGTNTKK REQFNKLIED CKAGKIDMII 
TKSISRFSRN TLDCLNYVRQ LKDLGIGVIF EKENINTLDG KGEVLLSILS SLAQDESRSI
SENSTWGIRR RFEQGKVTIN HTKFLGYDKD EDGNLIINEK QAKIVRRIYT DYLNGKGPNG
ITRALEAEGV PNWNGKVKWY ESSIRKMLSN EKYKGDALLQ KTYTVDFLTK KRVVNTGQIP
RYYVEESHPA IIDKDMWEAV QLEMERRRAF AEKHGIKKID YATADNPFAG RVICGHCGSL
FGRKVWNSTD ERLRRIVWRC NGKYPAKGKK GCESRHIDDR VLYQAFVDIF NTLVKNKNYF
FDKWKGLQES DNPLRRYKAK QFSKIITETG QIKEFDIALY FAFTEKVVLY DEGRVIVGLL
DGTEVECIIE