Gene Dtox_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2135 
Symbol 
ID8429117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2312317 
End bp2313162 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content43% 
IMG OID645034455 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit 
Protein accessionYP_003191586 
Protein GI258515364 
COG category[C] Energy production and conversion 
COG ID[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.986162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00977913 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGAA ATATTTCCGT TCAGGATGTA ACAGCAAATG TAGCTGAGTT ATGTATGGAG 
GCAAATTATC ATCTGGGTAA TGACGTGCGC TCAGCTTTGC AAAACGCCGT GGAAAAGGAA
ATTTCACCTG TGGGAAAAGG TATTCTGCAG CAACTTGTAA CCAATGCTGA CATTGCTTCC
ACAGAGGAAA TGCCGATTTG CCAGGATACT GGTTTCACAG TGATCTTTCT TGAAATCGGG
CAGGAGGTGC ATTTATTCGG TGGCGACTTA TATGAAGCTG TCGACGAGGG TATCAGGCAG
GGTTATATGA AAGGCTATTT GAGGAAATCC ATAGTCAATC ATCCACTGGA GAGGGTGAAT
ACAGGGGATA ATACACCAGG TGTTATACAT ACTAAAATTG TTCCCGGCAA CCAGTTAAAA
ATTACTGTCG TTCCAAAAGG TGGCGGCAGT GAAAATATGA GTGCTGTGAA AATGCTAAAG
CCGTCAGAAG GAGTAAATGG GGTAAAGAAA TTTATACTGG AGCAAGTAGC CACGGCTGGC
CCTAATTCCT GTCCGCCTGT CATAGTAGGT GTGGGAATTG GGGGAACGCT TGAGAAGGTG
GCTCTTTTAG CCAAGGAAGC GCTTTTAAGA CCTGTTGGAG AAAAGAACAG TATAGGAGAT
ATAGCAAAAT TAGAGGAAGA ACTTCTTATT GATATTAATA AACTGGGTAT AGGGCCACAG
GGCTTTGGCG GGGTTACAAC CGCACTGGCA GTGCATATAG AAATATTTCC GGCACATATA
GCCAGCTTGC CTGTAGCAGT TAACATAAAC TGTCATGCCA GTAGACATAA AACAAGATTT
CTTTAG
 
Protein sequence
MIRNISVQDV TANVAELCME ANYHLGNDVR SALQNAVEKE ISPVGKGILQ QLVTNADIAS 
TEEMPICQDT GFTVIFLEIG QEVHLFGGDL YEAVDEGIRQ GYMKGYLRKS IVNHPLERVN
TGDNTPGVIH TKIVPGNQLK ITVVPKGGGS ENMSAVKMLK PSEGVNGVKK FILEQVATAG
PNSCPPVIVG VGIGGTLEKV ALLAKEALLR PVGEKNSIGD IAKLEEELLI DINKLGIGPQ
GFGGVTTALA VHIEIFPAHI ASLPVAVNIN CHASRHKTRF L