| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2110 |
|---|
| Symbol | gpsA |
|---|
| ID | 8429092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2285864 |
|---|
| End bp | 2286904 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645034431 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_003191562 |
|---|
| Protein GI | 258515340 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.63219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.422397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAACA AAATTGCAAT ACTGGGGGCT GGGAGCTGGG CTACAGCTCT GGCTGCTCTG
TTGAGTAAAA AAGGCTATCC GGTGATGATG TGGGCAAGAA GTCAGGAACA AGTTACACAA
ATTAATAATT TTCAAGAAAA TACCCGCTAT TTACCAGGAG TGTTTTTACC TCCCCAATTA
ATGGCTTCAA CAAATTTAGA GGAAGTAGTG TCTGACTGTA AAACAGTTAT TTTCGGGACT
CCTTCCCATG CTTTTAGAAA GATTTTGCAA GAGGTGTTGC CATATGTTCA TAAAGAAGCC
GTTTTTGTTA ATACGGCCAA AGGTATTGAG GAAGATAGTT TATACCGTAT GTCAGAGGTA
TTTATGCAGG AGGCAGGCAC TCAAAGCTTG TCCCGTTATG CGGCGATTTC CGGTCCCAGT
CACGCAGAAG AGGTGGGACA GAATTTGCCC ACTACAGTTG TAGTTGCCGC AAAAGAAAAG
ATTGTGGCAG AACAGGTTCA GGACATCTTT ATGACTGATA TGTTTCGGGT TTATACAAAC
CCCGATTTGC TGGGAGTAGA ACTTGGTGGA GCCTTGAAAA ACATCATTGC TTTAGGAACC
GGCATTTCAG ATGGCCTTGG TTTTGGCGAC AACACAAAAG CAGCTTTAAT GACCAGGGGG
TTGGCTGAAA TAACCAGGTT AGGTATTGCT ATGGGTGCTA ATCCTTTAAC CTTTGCCGGT
CTGGCCGGAG TAGGCGATCT GATAGTTACC TGCACCAGTG TGCACAGCCG TAACAGGCGG
GCAGGTATAG AAATAGGACG AGGCAAATCC TTGCAAGAAA CCTTGAGTGG GATAAATATG
GTTGTTGAGG GTGTTCGTAC TACGGCCGGC GCACATGGTT TGGCGCAAAG ATATGATGTA
AAAATGCCTA TTACGGAACT GACTTACGAA GTATTGTTTA AAGGCTTAGC TCCTCTGACA
GCTGTCAATA AACTTATGAC CAGGCTCAAG ACACATGAAG TTGAAGAAGT TGCTTTAGCA
GCTGTAAACT GGACGAAATG A
|
|---|
| Protein sequence | MGNKIAILGA GSWATALAAL LSKKGYPVMM WARSQEQVTQ INNFQENTRY LPGVFLPPQL
MASTNLEEVV SDCKTVIFGT PSHAFRKILQ EVLPYVHKEA VFVNTAKGIE EDSLYRMSEV
FMQEAGTQSL SRYAAISGPS HAEEVGQNLP TTVVVAAKEK IVAEQVQDIF MTDMFRVYTN
PDLLGVELGG ALKNIIALGT GISDGLGFGD NTKAALMTRG LAEITRLGIA MGANPLTFAG
LAGVGDLIVT CTSVHSRNRR AGIEIGRGKS LQETLSGINM VVEGVRTTAG AHGLAQRYDV
KMPITELTYE VLFKGLAPLT AVNKLMTRLK THEVEEVALA AVNWTK
|
|---|
| |