| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2102 |
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| Symbol | |
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| ID | 8429084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 2277288 |
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| End bp | 2279318 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645034423 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein |
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| Protein accession | YP_003191554 |
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| Protein GI | 258515332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
[TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.573374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA TTGTTGCGGA TAAAGCAGGT TTTTGTTTTG GAGTAAAAAG AGCTATAGAT
ATGGCCAATG ATGTGGTGCG TAAACGGGAC GGACCTATTT ACTCGCTGGG TCCGCTGATT
CATAACCCGC AGGTTGTTGA TAAATTGGCG CAAGAAGGCA TCATAGCTAT TGATGATTTA
AAAGAAATAC ATGCAGGTAC CGTAATTATT CGTTCTCACG GAGTGGGACC GGAAATTCTA
TCAGAGGTCT ATGAAAGAGG TTTAAATCTT ATTAATGCAA CCTGTCCTTT TGTAAGCCGA
GCCCAACAAA TTGCCAGAGA TCTTTATACA GAAGGCAGGC AAGTGATAGT TGTAGGAGAC
AAGGATCATC CTGAGGTTCA AGGTATAGTG GGTTGGGCTA ACGGTCAAGC CCTGGTAGTT
CAGAATTCTC TGGAAGCTGA GGCACTGGGG GCAATATCCA ATGCAGGTGT CCTGGCACAA
ACGACTCAAC CACTGGTAAA TTTTCAGCAA GTGGTAGATG TCTTAAAACA AAAAACTGAG
CAGCTTAAAG AATGCAATAC CATTTGTCAT GCTACCGGTG AAAGGCAGCA AGCGGCACTT
GAACTGGCAC GCAATGTGGA TGTAATGGTA GTAGTGGGTG GAGCAAACAG CGCCAATACA
GGGAAACTAG CTAATTTGTG CCGCTCTACC GGAACACCGG CTTACCAAAT TGAAACTGCC
GGAGAGTTAC GTGTCGGGTG GTTTGCCTGT GTTGAAAAAG TTGGGCTTAC AGCAGGTGCA
TCAACACCTG ACTGGATTAT AGAGGAGGTT AAAAAACGCA TGAATGAATT AGGCGAAATG
AATGGTATAG AAGAAAGTAA AGAGCAACTG GAAGAAATAA ACTCTGCTGA AGAGGGTATG
CAGGATTCAG TAGAAGTTAA AGCGCTGCAC AATGGAGATA TAGTAAAAGG GGTTGTAGTG
CAAATAGGCC AGGACGAGGT TCTGGTAGAT GTTGGGTCAA AGTCGGAAGG TTTTATATCT
GCTAAGGAAT TATCAAGCTT TAACATTAAT TCCCCGGATG AAGTGGTCAA GATTGGGGAT
GAAATAGATG TATTTGTTAT AAGTGCGGAG GATAACGAAG GTAGGATAAA ATTATCAAAA
ACCAGAGCAG ATGCCGAAAA TGCATGGGCT AAATTGGAGA GCCTATTGGA AAGCAGTGAA
AAGATAGAAG GAACAGTGAG AGAGGTTGTT AAAGGAGGTT TGCTGGTAGA TGTAGGAGTA
AGGGCCTTTT TGCCTGCTTC ATTGGTAGAT AAGGGTTATG TGGAAGACCT CTCTAAATAT
GTAGGGGAAA ATATAACTGC TCAGGTGATT GAGATTAACC GGATCAGGAG AAAAGTTGTA
CTTTCCAGAA AGGCTATCTT AGAAGAGGAA TATGCTAATC GCAAGGAAGA GCTGCTGAAT
TCCTTACAGG AGGGCCAAAC AGTAAGTGGT ATAGTTAGAA GAATTACTAA TTTCGGCGCT
TTTGTTGATA TCGGAGGTGT TGACGGTCTT TTACACATAT CTGAAATGGC CTGGTACAGG
GTTACTCATC CTTCAGAAAT TGTTCAGGTA GGTGATGAAG TAACTGTTAT GGTATTAAAG
ATTGACCGCA ATGCAGATAA GATTTCACTG GGATTGAAAC AAGTTTTAGC CAATCCCTGG
GAAAATGTTG ATTCCAAGTA CCCTGTGGGA GCGATTGTAG CGGCAAAAGT TGTTCGTTTA
GCACCCTTTG GCGCCTTTGT TCAATTAGAA CCAGGTGTAG AAGGTTTGGT ACACATTTCC
CACTTGGCAG ATCATCATGT TGAAAAACCT GAGGATGTTG TGAGTGAGGG TGAAGAAGTT
AATGTGAAGG TTTTAAGCGT TGACACACAG GAAAAGCGTA TTCGTCTCTC CATTAAAGAA
GTGACCAAGA AAGTTAAAGA AGAAAAACCG GTACAAAACT ATGAAAGCAA TAGCCAAGGT
TCAGGAGAAA TCACTATTGG TGAAATTTTA GGAGCCAGTC TAAAAAAATA A
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| Protein sequence | MKIIVADKAG FCFGVKRAID MANDVVRKRD GPIYSLGPLI HNPQVVDKLA QEGIIAIDDL
KEIHAGTVII RSHGVGPEIL SEVYERGLNL INATCPFVSR AQQIARDLYT EGRQVIVVGD
KDHPEVQGIV GWANGQALVV QNSLEAEALG AISNAGVLAQ TTQPLVNFQQ VVDVLKQKTE
QLKECNTICH ATGERQQAAL ELARNVDVMV VVGGANSANT GKLANLCRST GTPAYQIETA
GELRVGWFAC VEKVGLTAGA STPDWIIEEV KKRMNELGEM NGIEESKEQL EEINSAEEGM
QDSVEVKALH NGDIVKGVVV QIGQDEVLVD VGSKSEGFIS AKELSSFNIN SPDEVVKIGD
EIDVFVISAE DNEGRIKLSK TRADAENAWA KLESLLESSE KIEGTVREVV KGGLLVDVGV
RAFLPASLVD KGYVEDLSKY VGENITAQVI EINRIRRKVV LSRKAILEEE YANRKEELLN
SLQEGQTVSG IVRRITNFGA FVDIGGVDGL LHISEMAWYR VTHPSEIVQV GDEVTVMVLK
IDRNADKISL GLKQVLANPW ENVDSKYPVG AIVAAKVVRL APFGAFVQLE PGVEGLVHIS
HLADHHVEKP EDVVSEGEEV NVKVLSVDTQ EKRIRLSIKE VTKKVKEEKP VQNYESNSQG
SGEITIGEIL GASLKK
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