| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2085 |
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| Symbol | |
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| ID | 8429067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 2261963 |
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| End bp | 2263318 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645034406 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003191537 |
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| Protein GI | 258515315 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000026544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCA CTAAGATACT GTTATCGGAA AAAGAAATGC CTACCCGCTG GTATAATATA
CAGGCGGACA TGCCCAATTT ACCAAAACCA CCTTTGAACC CGGTTACCAA ACAACCGGTT
GGTCCGGAAG ATTTATCTGC AATCTTTCCC ATGGAACTGA TTAAACAGGA GGTAACCCGG
GAACGGTGGA TAGATATTCC TGAAGAGGTT CAGGAAATAT ATCACCTGTG GAGACCTTCA
CCTGTTATGA GGGCAAAGCA ACTGGAAAAA GCCCTTGATA CACCGGCAAA AATATATTTT
AAGTACGAGG GTGTCAGCCC GGCCGGAAGC CATAAACTAA ACACCGCTGT TCCTCAGGCA
TACTTTAATA TGAAAGAGGG CATTATGCGT CTGGCTACTG AAACCGGTGC AGGACAATGG
GGAGTTGCAC TTTCCCAGGC CTGCAACTTT TTTGGCATGA AATGTTTGGT ATATATGGTA
AAGGTAAGCT ACCACCAAAA ACCCTACAGG CGTTCTATGA TGCAGATTTT TGGTTCCAAT
GTAGTAGCCA GTCCCAGTGA ATTAACTGAG GCAGGCAGAA AAATATTAGC AGATAACCCG
GAATCGCCGG GCAGTCTCGG TATTGCTATC AGCGAGGCTG TGGAAGACGC GGCCAAAAGA
GATGATACGA ATTATGCTCT GGGCAGTGTG CTTAATCATG TGCTTTTGCA CCAAACAGTT
ATAGGTTTGG AGGCTAAAGA ACAGCTGGCT AAAGATGACG TTTATCCTGA CATAGTTATT
GCCTGCTGCG GCGGCGGGAG TAATTTCGGC GGCATGGCAT TTCCTTTTGT CTATGACAAG
CTGACCAAGG GTACCAATGT TCGCCTGATT GCAGCAGAGC CCAGCGCTTG TCCGACTCTT
ACAAGGGGAC ATTTCGGCTA TGATTATGGT GATGTGGCAG GTTTAACCCC GCTGCTATGG
ATGTATACTT TGGGTACCGA CTTTATGCCG CCCGGCATTC ATTCAGGCGG TTTAAGATAC
CACGGTGATT CGCCGTTGGT AAGTCAATTA CTGCATGACG GTATTATTGA GGCCAAGTCC
TTTAACCAGA CTTCTGTATT TAACGCAGCT GTTTTGTTTG CCAAGTGTAT GGGTATAGTA
CCGGCTCCCG AATCTTCTCA TGCTATTCAA TGTGCTATTG AAGAAGCTTT AGCTGCAAAA
GAAGCAGGGG AAGCTAAAAC CATAATATTT AATTTAAGTG GTCATGGTTT CCTTGATTTA
CCCTCGTATG ACAGTTTTAT GGCCGGAAAG CTTATTGATT ATCCGTTGCC TGAAGAGGAA
TTAAAGCAAT CTTTAGCCAG ATTGCCGCAG ATTTAA
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| Protein sequence | MSATKILLSE KEMPTRWYNI QADMPNLPKP PLNPVTKQPV GPEDLSAIFP MELIKQEVTR
ERWIDIPEEV QEIYHLWRPS PVMRAKQLEK ALDTPAKIYF KYEGVSPAGS HKLNTAVPQA
YFNMKEGIMR LATETGAGQW GVALSQACNF FGMKCLVYMV KVSYHQKPYR RSMMQIFGSN
VVASPSELTE AGRKILADNP ESPGSLGIAI SEAVEDAAKR DDTNYALGSV LNHVLLHQTV
IGLEAKEQLA KDDVYPDIVI ACCGGGSNFG GMAFPFVYDK LTKGTNVRLI AAEPSACPTL
TRGHFGYDYG DVAGLTPLLW MYTLGTDFMP PGIHSGGLRY HGDSPLVSQL LHDGIIEAKS
FNQTSVFNAA VLFAKCMGIV PAPESSHAIQ CAIEEALAAK EAGEAKTIIF NLSGHGFLDL
PSYDSFMAGK LIDYPLPEEE LKQSLARLPQ I
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