| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2002 |
|---|
| Symbol | |
|---|
| ID | 8428984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2166724 |
|---|
| End bp | 2168508 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645034329 |
|---|
| Product | oligoendopeptidase F |
|---|
| Protein accession | YP_003191460 |
|---|
| Protein GI | 258515238 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000655164 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.321245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAACG CAACAGCAGA CAAATACTCC TGGGACTTAA CCGCTATCTT CCCCTCTGAC
ACAGCCTGGG AAGATGCCTT AAAGCAAATA CAGGAGCTAA CCTCCAAAGT CACCTCTATG
CAGGGCAATC TAACCGTTTC GGCAGAAAAC CTGTATGCCG CTCTGGCCGA TATTGACCGG
TTATCCATCA AACTGGAGCA GGCTTATAGT TACGCCAGGT TGGCTTTTGA CACTTCCATG
GGTGACAACA CAGCCAAAAC ACGCTATGAG AGAATTGATG CTTTGTCTTC GGGAATAGAC
GCACAATTGT CTTTTGTTGA ACCGGAACTG CTCCAATTAA ATGAAGAAAG CTTCCTATCT
TATAAAAAAC AGCTGCCGGA ACTGGAAATA TACTCTTTTA AATTTGAAAA ACTATTTGCT
CTGAAAAAAC ATGTCCTCTC ACCGGATATT GAACAAATTT TGACTAAAAT GAACTCTCTG
GGCCGCTCCT TTAAAAAAAT ATTTGACGAT ATAGCTGTCA ATGATTTAGA TTTTCCCGAA
GTGGCAGGTT CCGACGGGCA AAAGTTTACC GCCGGCGAGG CTAATTATCT CAAGTGCATG
ACTTCTCAAG ACAGGGTTTT GCGTGAGAAT TATTTTAAGG GACTGCTCAA TACTTACGCC
TCACACAAAA ATTCCATTAC CTCCACTTAT TATGGAGCAG TTAAAAACAG CATATTCACT
GCCGGTATCA GAAACTTCAG CTCATCACTG GATATGGCCC TTTCCAGCAA CTTCATACCG
CCGGGAGTTT ACGATAACTT AATCAGCACC GTGCGCAGCA ATGTCGACAA GCTGCAGCGC
TATATAGCTT TGCGTCAAAA AATCCTTGGT CTGCCGGAAA TTCATTTTTA CGACCTGTTT
GTCCCGGTGG TCAAAGATAT GAATAAAACC TACACTTTTG AAGAGGCCAG AGATATTGTG
CTGGAGGCAC TGGCTGTTCT GGGAGAGGAT TATGTAGGAA TACTGAAGCG GGCTTTTTCC
GAGCGATGGA TCGATGTCTA CCCGGCTAAA GGCAAGAGAT CAGGTGCTTA CGCTATGGGA
ATTTACGGCA CTCACCCTTT CTCCCTGTTA AACTTCTCCG GTACTGTAGA GGATATTTTC
ACCCTGGCCC ATGAGTTAGG CCATGTAATG CACAGTTATT TCAGCAATGA AAACCAGCCT
TACATAAATT CACATTATGT AATTTTTACG GCCGAAGTGG CCTCAACCGT AAACGAGACT
CTGCTCTTAA ACTTTTTATT AAAGAAATCA ACCTCTGAGC AGGAAAAAGC CAACTTGTTG
AGCATGCATC TGGACAGCAT CCGCTCGACC CTTTATCGCC AGACATTTTT TGCGGATTTT
GAAAAGCAGG TTCACGAAAC CGTGGAAAAA AATCAGCCTC TAACCCCGGA GACACTGCAA
ACCGTCTATA AAGACTTATA TAAACTGTAT TATGGAGAGA ATTTTGTCAT TGATACGGAA
TTAACCTGTG AATGGCTGCG AATACCTCAT TTTTACTCCC CCTTTTATGT CTACCAGTAT
GCAACAGGTA TTTCAGCGGC TATAAGCATA GCAGCCGGCA TCTTGAATAA AAACCGGTCA
TTTTTAACAG GCTATAAGAA TTTTCTTAAA TCCGGAGGTT CTAAACACCC AATAAACTTG
CTGCAAGAGG CAGGTGTGGA TATGTCAACA CCACAGCCCA TCCAAGATGC TTTAAATGAT
TTTGAAAACT CGGTAAAACA ACTTTCGTCT ATTTTAAAGT TATAG
|
|---|
| Protein sequence | MINATADKYS WDLTAIFPSD TAWEDALKQI QELTSKVTSM QGNLTVSAEN LYAALADIDR
LSIKLEQAYS YARLAFDTSM GDNTAKTRYE RIDALSSGID AQLSFVEPEL LQLNEESFLS
YKKQLPELEI YSFKFEKLFA LKKHVLSPDI EQILTKMNSL GRSFKKIFDD IAVNDLDFPE
VAGSDGQKFT AGEANYLKCM TSQDRVLREN YFKGLLNTYA SHKNSITSTY YGAVKNSIFT
AGIRNFSSSL DMALSSNFIP PGVYDNLIST VRSNVDKLQR YIALRQKILG LPEIHFYDLF
VPVVKDMNKT YTFEEARDIV LEALAVLGED YVGILKRAFS ERWIDVYPAK GKRSGAYAMG
IYGTHPFSLL NFSGTVEDIF TLAHELGHVM HSYFSNENQP YINSHYVIFT AEVASTVNET
LLLNFLLKKS TSEQEKANLL SMHLDSIRST LYRQTFFADF EKQVHETVEK NQPLTPETLQ
TVYKDLYKLY YGENFVIDTE LTCEWLRIPH FYSPFYVYQY ATGISAAISI AAGILNKNRS
FLTGYKNFLK SGGSKHPINL LQEAGVDMST PQPIQDALND FENSVKQLSS ILKL
|
|---|
| |