Gene Dtox_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1967 
Symbol 
ID8428949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2099693 
End bp2101366 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content53% 
IMG OID645034295 
ProductABC transporter related 
Protein accessionYP_003191426 
Protein GI258515204 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000973453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000019126 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGATTAGGA TAGAAAAACT GATTTTCTTC TACGCGGATG ACAGGAAGCC CGCTTTGAAC 
GGGATTGATT TGGAAATAGA GGACGGTGAA TTCGTCCTGA TTACAGGTTC CTCAGGAAGC
GGCAAGTCGA GCCTGGCGCG CTGTTTGAAC GGACTCATCC CGCACTTTTA TGGGGGGCGT
CTGGGTGGGC GGGTAGAAGT GTCAGGCATG GATGTGAGCA CACACGCTCC GAATAAAATG
GCCACCTGTG TGGGGATGGT CTTCCAGGAT CCTGAAAACC AACTGGTCAC AGCCGATGTA
GAGCGTGAGA TTGCCTTTGG TATGGAAAAC CTGTCACTGC CCCGTCATGA GATGGCTAAG
CGCCTGGAAG AAGTGTTGGA TACTGTTGGC ATTGCCGCTT TGAGAAAGCG GCAGCTGCAC
GAACTTTCAG GAGGGGAGAA ACAAAAGGTG GCCATCGCTT CGGTGCTGGT ATTGAAGCCG
GAAATCCTGG TTCTTGACGA GCCGACATCT GAATTGGATC CGCAGGGCGC CGAGGATGTG
CTGTCGACGG TGCAGAGGCT GAATGACGAA TTGGGGATTA CGGTTATTTT AGTGGAGCAC
CGGTTGGAGA GAGTCGTTCA TCTGGCTGAC AGGCTGATCG TAATGGAACA GGGACAGATC
ATCGCCGACG GTACCCCGGA ACGGGTTATG GAAAAACAAT ATGTAAGCAT TTGCCGGGCG
GGAGTAGGCA TCCCACCGCT GATAAGGCTC GTACATGAGC TCAAGGAACG GGGTATGGAG
ATTAAGGGTG TGCCTCTTAC CGTCAAAGAG GGCCGCCAAC TGCTGAAAGG AATATTTGAA
GACTCAACAT ATTCACCGCC GCCGGCTGCG GATAGGCCGG AAAGCGCCTC TCCCGTGATC
GAGACGGAAA ATCTCTGGTA TGCCTATAAT CCTCCGTATG CTGCCCTGAA GGGCGTTGAT
TTAAGCATTG GCAGGGGGGA GTTTGTGGCA ATTATGGGCC GCAACGCTGC CGGTAAGAGC
ACTCTGGTAA AGCATTTCAT CGGCTTGTTG AGGCCCTCCA GAGGGAAAGT GAGGGTAAAT
GGCTTGGATA CAATGCAGAC CAGTGTTGCC AGTCTGGCCA GACATGTCGG GTATGTCTTT
CAAAACCCCA ATGACCATCT TTTTGCCGAA ACGGTAGAGG AGGAGGTTGC CACTGCCTTA
AAGGGCCTGG GTTTCAGTGA TGTGGAAGGC AGAGTGCGGG AATGGCTGGA CAGGTTTGAC
CTGTTATCTT ATGCCAAGCA ATACCCCAGA TTCTTGAGCG GCGGCGAAAA GCAGCGGGTA
GCCCTTGCCA CAGTGTTGTC TGTACAGCCG CAGGTGCTGA TACTTGATGA GCCTACGAGG
GGAATGGATC AGAAACTTAA AGATTACCTG ATGCGGCTTC TGTGCGATTA CCAGAGCAAA
GGCAATACAG TGATTATCGT TACACACGAT GTTGAGATGG TGGCGGAGTA CGCGCAGCGG
GTGATCCTGC TGGGAGAGGG TAAGGTTATT GTTGACGGGG ACAAGCGTCA GGTATTGTCC
CAGGCCTTGC TGTTCTCTCC CCAGATTAAC AGGGTTTTTC AGGGCTTTGC CAGGCTGGGC
GTGCCACAAG ATATTCTGAC AACGGGTGAG GTGCTGCAAT TGCTGCAGCA TTGA
 
Protein sequence
MIRIEKLIFF YADDRKPALN GIDLEIEDGE FVLITGSSGS GKSSLARCLN GLIPHFYGGR 
LGGRVEVSGM DVSTHAPNKM ATCVGMVFQD PENQLVTADV EREIAFGMEN LSLPRHEMAK
RLEEVLDTVG IAALRKRQLH ELSGGEKQKV AIASVLVLKP EILVLDEPTS ELDPQGAEDV
LSTVQRLNDE LGITVILVEH RLERVVHLAD RLIVMEQGQI IADGTPERVM EKQYVSICRA
GVGIPPLIRL VHELKERGME IKGVPLTVKE GRQLLKGIFE DSTYSPPPAA DRPESASPVI
ETENLWYAYN PPYAALKGVD LSIGRGEFVA IMGRNAAGKS TLVKHFIGLL RPSRGKVRVN
GLDTMQTSVA SLARHVGYVF QNPNDHLFAE TVEEEVATAL KGLGFSDVEG RVREWLDRFD
LLSYAKQYPR FLSGGEKQRV ALATVLSVQP QVLILDEPTR GMDQKLKDYL MRLLCDYQSK
GNTVIIVTHD VEMVAEYAQR VILLGEGKVI VDGDKRQVLS QALLFSPQIN RVFQGFARLG
VPQDILTTGE VLQLLQH