Gene Dtox_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1962 
Symbol 
ID8428944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2089730 
End bp2091400 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content53% 
IMG OID645034290 
ProductIg domain protein group 2 domain protein 
Protein accessionYP_003191421 
Protein GI258515199 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0577426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0531798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAG TCAAAATGAA GTTGACCGGG CTGCTCTTTT TTCTGATCAT GGTCCTTATC 
CTACCGGCAG CCGGGTATGC AGCCGGCAGT GATTGGCCAC AGTTCCATAA CAGCGCGAAC
AGCGCAGGTT ACTCTACTTC TGCCGCTCCG AATACCAATA ATCTGCTTTG GGCAAGTGAG
AATATCGGTG CCAGCATATC ATCTTCTCCC GTCATTGCCG GGGGCAAAGT GTATGTATAT
GGTTGTCCGA GCTCTGACGG GTTTTCGGCA AGCAAATCAT CAATTGTCTG CCTGGACGAG
ACCACCGGCG ACAAAATCTG GGAAACAGCA ATTGATAAGT CAAAATGGGG TTCCTGGTCC
TCACCGGCCT ATGATAACGG TAAGATATTC ATTGGTTCAG GCAGCAAGGC TTTCTGTCTG
GACGCCACCA GCGGCACTAT CCTGTGGTCT TATCCGATGC ATTTAGACGT AGTCAATGGC
AGTCCCCGTG TAGTGGACGG CAAGGCCTTC TTTACCGATT GGGATCCTAA CCACGGTGGT
ATCTCCTACA TTTACTGTCT GGATGCGAAC GGCGGCAGCA GGATATGGGA GCATCAGCTG
GTGGGAGATT CCCAATCTAC TCCGGCCTAC TGCGATGGCA AGATCTATGT GAACAGTTGG
GGTTACGTCA CGGGTGCCAA TACCGGAGCC AATAACACCT ATTGCCTGGA TGCCGGGGAC
GGGCATGAGA TTTGGCACCA GCAGGGGCTT GAAAAACAAA CCTGCGGTTC ACCGAGTGTA
GGAGGTGGCA AGGTCTTTGT TGCCACCTAT GATTTTTACG GAATGGGAGA ACTGGCAGCT
CTGGATGCCG GGGACGGTCA CATTATCTGG GGGCCTATAA CCATACAGCG TACAGATACG
ACGCCGGCCT ATGCTGACGG CAAGCTTTAC CTCTGCGGAG GCTGCGCCGG TTATTCCGAT
CAGGAAACCT ATTGCTTTGA TGCGGAAACC GGCAACCAGA TCTGGAAGCA GTCGGATCTG
GGGAACTGGA CCTGCTCGGT AGCGGTTGCT GACAACAAGG TCTTTGTCGG TAAGGCCGGA
GAATTTTTTG ATTATACCGG TGTGTATGCA CTGGATGTTG CAGACGGTCA TGTTGTATGG
AGTTCCGACA AGGGAGGTGC CTCCCCAGTG GTGGCGGATG GCAAGGTCTT CAGCTTAAGC
GGCGGTATAG TTTATGCCTT TGGCTCCGCT TCGGCTTCTG TTTCGGTAAC CGGAGTATCC
CTTGACAAGA CTGCCGATAC CATTCCGGTG GGCGGCACTG ATACTTTGAC GGCGACGATT
GCACCGGCCA ATGCCAGCAA CCAGGGTATC ACCTGGGCTT CCGACAACGA GACAGTGGCC
ACAGTGGATG CCGCTGGCAA AGTGACAGCC GTGTCCACCG GTACTGCCAA TATCACCGTC
ACCACGACAG ACGGGGGCTT TACCGCTGCT TGCCTGGTTA CCGTTACTTC AGGCGGTGGT
TCCGGCAATG ATCTGAACGG TGACGGAATC GTAAATGTGG TAGATTTGAT TTTGATCGGC
CAGCGTTTTG GTGACAGCGA TGTTCCCGGT TGGATAAATC TAGATGTTAA CCGGGATGGC
AAGGTGGATA TATTGGATAT GGTTCTGGTT GCTCAGAACT TTACCTCATA G
 
Protein sequence
MLRVKMKLTG LLFFLIMVLI LPAAGYAAGS DWPQFHNSAN SAGYSTSAAP NTNNLLWASE 
NIGASISSSP VIAGGKVYVY GCPSSDGFSA SKSSIVCLDE TTGDKIWETA IDKSKWGSWS
SPAYDNGKIF IGSGSKAFCL DATSGTILWS YPMHLDVVNG SPRVVDGKAF FTDWDPNHGG
ISYIYCLDAN GGSRIWEHQL VGDSQSTPAY CDGKIYVNSW GYVTGANTGA NNTYCLDAGD
GHEIWHQQGL EKQTCGSPSV GGGKVFVATY DFYGMGELAA LDAGDGHIIW GPITIQRTDT
TPAYADGKLY LCGGCAGYSD QETYCFDAET GNQIWKQSDL GNWTCSVAVA DNKVFVGKAG
EFFDYTGVYA LDVADGHVVW SSDKGGASPV VADGKVFSLS GGIVYAFGSA SASVSVTGVS
LDKTADTIPV GGTDTLTATI APANASNQGI TWASDNETVA TVDAAGKVTA VSTGTANITV
TTTDGGFTAA CLVTVTSGGG SGNDLNGDGI VNVVDLILIG QRFGDSDVPG WINLDVNRDG
KVDILDMVLV AQNFTS