Gene Dtox_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1955 
Symbol 
ID8428937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2077169 
End bp2077879 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID645034285 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003191416 
Protein GI258515194 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.295041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATA TTCTAGTTGT AGATGATGAG CAAAATGTAC TTGAAATAGT CCGATTTAAC 
CTGGAGCGTG CAGGCTACAA GGTGATAACG GCTAAAGACG GCAATATTGC GCTTGAATTA
GCCCGTTCAA GAAATCCTGA TTTAATCGTA TTAGATTTGC TAATGCCAGG GCTGGATGGT
TATTCCATAT GCCGGCTGCT GCAGCGCGAT CCTGCGACCA GACGAATTCC CATAATCATG
CTTAGCGCAA GGTCAGATGA ATTGGACAAG GTTTTAGGCT TGGAAATGGG AGCGGATGAT
TACATAACCA AGCCTTTTAG TCCTCGGGAA CTGGTAGCTC GGGTCAATGC CAGATTAAGG
CGCGATAAAA AAGAAGAATT CATTATTCCA AGGGATAGCA AAAACATTAT CATGAGGGGT
AAATTGATTA TTGATAAGGA ATGTATGTCA ATTGAACTGG GTGGCAAAAA ACAATATTTA
AAGGCCAAGG AGTTTGAGCT GTTGTATTTT TTGGCTTGCC AGCCAGGTAA ATATTTCTCC
CGATATTTCC TATTGAAACA ATTTTGGGAA TTTGATGTTT CTAATGATTC CCGTACTGTT
GATGTACACA TAAGGAGAAT TAGACAGAAG TTGGAGATAC TAAATGCAAA CCAGCAATAT
ATTGAAACTG CACGTGGTGT TGGATATCGT TTTATAGAAA CAAATCTCTA A
 
Protein sequence
MPNILVVDDE QNVLEIVRFN LERAGYKVIT AKDGNIALEL ARSRNPDLIV LDLLMPGLDG 
YSICRLLQRD PATRRIPIIM LSARSDELDK VLGLEMGADD YITKPFSPRE LVARVNARLR
RDKKEEFIIP RDSKNIIMRG KLIIDKECMS IELGGKKQYL KAKEFELLYF LACQPGKYFS
RYFLLKQFWE FDVSNDSRTV DVHIRRIRQK LEILNANQQY IETARGVGYR FIETNL