Gene Dtox_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1870 
Symbol 
ID8428849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1982903 
End bp1984315 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content34% 
IMG OID645034205 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_003191339 
Protein GI258515117 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000031179 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.169965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAAGT GGGTAGTTTT CGATGCACAA GTGGGCAGTT ATTATAATTT TAGAAAGGGT 
GATAAGGTGC CACATATCAC TTTGAATACT GTACTTATTT ATATTTTCTG TGGAATATTA
CCGGCTGTCA CTAATGTAGT AGTCGGCTGC GCACTCATTG GGGTTCCCAT TAACAGGAAG
CAAATTTTAC TGCTTGCTTT AGTTGCTATA GTTCCATTCG GAATCGTTGG CTCATTTCAT
CTGCCACCAG GACTAAATAT TTTAGTTCTA TTTGGGACAT TAACAGCTTT CTGTCATTTG
GTTTTAAAAC TGAACCTTGT GACTGCTTTA TTTATTCCGA CCATAAGCCA TTTTTTATGG
TCACTTTTTG AAAGACCAGT TTTATATATA ATTTTAAAGA TTTTTGGTTT AACCGAGCAG
ATGTTCACTC ATGGTCAAAA CTTAATTGCA AATTATACTC TTATGTTATC TATCGGGGGC
TTTTTATTCG TTATCGCTTA TGTTTGTACC AGATATGATT TAAATTTATT TGCTTTATTA
AAGAGGTCAA ACTTAGATAT TGACACACGT TTTACCAATA ATTTATTTAC TATGGTGCTG
CTCTTATTAA TCCCGGTCAT CAGCATTATC CTCATAAATA GTGCAATTAA GTTATTTATT
GGTGCTGATG AGGTTAAATA CTACTTAACT ATACTTACCA GAATTGATGT ATTATTGATA
CTTATATTAG GTTCTATGAC TATTTATGGT ATTACAAAAG TCTTTAGAAT TCTGGAACAA
GAGTGGGCAG CCAAAACTGC TGTTAAGAAT CTTGGATATC TGGAGAATCT TTTTCTATCC
ATACGTAGGC AAAAGCATGA TCATAATCAC CACTTACAGA CCGTTTATGG ACTTCTAAAT
GCCAGCGAAT ACGATAAAGC CAAGGAATAT ATCAGGGATA ATTACCATGC CCTGTGCTCT
CATAATGAGT TAATAAAAAC GGATAATCCT GAATTCATGG CTCTGTTATA TGCAAAAATA
TGTATTGCTG AGTCGCTTGA TATAGATATA AATGTTAATA TCACAGGCAG TCTGAAAGGC
TTATCCATAA GTAATCACGA CCTAAATTCC GTAGTCGGAA ATTTATTGGA TAATGCTATG
AACGCACTAA AAAATATAGA GATAGGTATA AAAAGAATTG ATTTAAGTGT TTCTCGTACC
GCAGATATGT TGCACATTGA ATCCAGCAAC AGCGGCAGTA TTACAGAAGA AGAATTTATT
AAGAGAATAA ATCAGCCAAA ACTGTCAACC GGCAGACACG GTCACGGTAT ATCAATTATC
AAGGATATAT CAAGCAAATA CGGTGGTAAA TTAGAGGTTG CGTTTGATAT TAATAAAATA
ACTTTATTTA GCACTATACC GCTTAAAGGT TAG
 
Protein sequence
MHKWVVFDAQ VGSYYNFRKG DKVPHITLNT VLIYIFCGIL PAVTNVVVGC ALIGVPINRK 
QILLLALVAI VPFGIVGSFH LPPGLNILVL FGTLTAFCHL VLKLNLVTAL FIPTISHFLW
SLFERPVLYI ILKIFGLTEQ MFTHGQNLIA NYTLMLSIGG FLFVIAYVCT RYDLNLFALL
KRSNLDIDTR FTNNLFTMVL LLLIPVISII LINSAIKLFI GADEVKYYLT ILTRIDVLLI
LILGSMTIYG ITKVFRILEQ EWAAKTAVKN LGYLENLFLS IRRQKHDHNH HLQTVYGLLN
ASEYDKAKEY IRDNYHALCS HNELIKTDNP EFMALLYAKI CIAESLDIDI NVNITGSLKG
LSISNHDLNS VVGNLLDNAM NALKNIEIGI KRIDLSVSRT ADMLHIESSN SGSITEEEFI
KRINQPKLST GRHGHGISII KDISSKYGGK LEVAFDINKI TLFSTIPLKG