| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1815 |
|---|
| Symbol | |
|---|
| ID | 8428793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 1923505 |
|---|
| End bp | 1924851 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645034156 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003191291 |
|---|
| Protein GI | 258515069 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.39624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.935092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAG TTTTGGCTGC TATTGAAGTA ACAATAGTAA GTACAGCTAT GCCAACTATT
GTTAGGGATC TAGGGAACAT CCATTTAATG AGTTGGGTTT TTGCTATTTA TCTGCTGGCC
ACCGCGATAA CTACACCAAT TTATGGTAAG CTAGCGGATC TTTTTGGGCG GAAAAAGGTA
TTTACCATTG GAATTGTTAT ATTCTTGATC GGATCTTCGC TTTGTAGTTT AGCTCATTCT
ATGGCCCATC TAATCTTTTT TCGGGCGATT CAAGGAATAG GGGCCGGGGC TTTATTTCCG
GTTAGCTTGA CGATTATCGG TGATATTTTT AATATTGAGG AACGGGCAAA GATCCAAGGA
CTAATTAGTG CAATTTGGTT CATTTCAGGA ATTCTGGGCC CGCTTGTCGG AGGCTTTATT
GTTGATTTAT TATCTTGGCA TTGGATATTT CTGATTAATA TACCTTTCGG GTTGCTTTCG
ATCAGCTTGA TCAAACTCTT TTTTCATGAG CAATTTACTA AGAAAAAGCG CTATATTGAC
TATCCGGGAG CCATCACTTT TACAATCGGT ATGACTTCCC TATTATATGC GATTATTTTA
GGTGGTCAGA ATAAGGCTTG GATCTCGCCA ATTACTTTGA GTTTATTGAT TAATGCAGTA
GGTTTTCTGT CTCTATTTTA TTTTATTGAG TTGAAATCAC CTGAACCTAT ACTCCCGCTT
AATTTATTTA AGTTGCCGAT GGTAATGGTT CCGAACTTAG CTACTTTCTT TTTGTGTACG
GTCTTAATCG GTTTGAATGT TTACTTGCCT ATATGGGTTC AAGGGGTGTT AAGCTATAAA
GCAACTGGTT CTGGGATTGC CTTAATTCCC ATGTCTGTGG GGTGGACACT GGGGGCTTTC
TACTGTGGAA AGCTATTAAT GAAGTTTAGT GTACGTAATA CCACTTCATT AGGGGCCGGT
GCCATTCTGG CTGGTTGTAG CTTGCTGGTG GCGATGGGTT TTTCGATTTT TGAATTGATT
TTTGGGATGT TTATTATCGG ACTGGGGTTT GGTTTAGCTC TGACTTCGTC CGGTATCGTG
ATCCAATCTT CCGTGGAATG GAATTTGCGT GGTTCTGCTA CGGCTCTTTT TACGTTTACC
CAAGCACTAG GTCAAACAGT TGGAGTGGCA ATGCTGGGGG TTTTATTTTA TCATACAGTT
AGCACTGGCT CAGCAACCTT GAACAAAGAA GTACTTACTT TTGGTTTACA CAATATTTTT
ATTGCCCTGA GTGTAATATC AGTCTTAGGC TTGTTTATTA ATTTATGGAT ACCTAAACAA
AAACTATCGG GTTCAAAGCT GCTATAA
|
|---|
| Protein sequence | MAIVLAAIEV TIVSTAMPTI VRDLGNIHLM SWVFAIYLLA TAITTPIYGK LADLFGRKKV
FTIGIVIFLI GSSLCSLAHS MAHLIFFRAI QGIGAGALFP VSLTIIGDIF NIEERAKIQG
LISAIWFISG ILGPLVGGFI VDLLSWHWIF LINIPFGLLS ISLIKLFFHE QFTKKKRYID
YPGAITFTIG MTSLLYAIIL GGQNKAWISP ITLSLLINAV GFLSLFYFIE LKSPEPILPL
NLFKLPMVMV PNLATFFLCT VLIGLNVYLP IWVQGVLSYK ATGSGIALIP MSVGWTLGAF
YCGKLLMKFS VRNTTSLGAG AILAGCSLLV AMGFSIFELI FGMFIIGLGF GLALTSSGIV
IQSSVEWNLR GSATALFTFT QALGQTVGVA MLGVLFYHTV STGSATLNKE VLTFGLHNIF
IALSVISVLG LFINLWIPKQ KLSGSKLL
|
|---|
| |