Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1794 |
Symbol | |
ID | 8428766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 1897702 |
End bp | 1899309 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645034129 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003191270 |
Protein GI | 258515048 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000923307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.17508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAA GTGTCAACAA GCAATCTTAT CTAAAAGGAG CATTAATTCT CACTACAGCA GGTATTTTAA TCAGGTTCTT AGGAGCAGCA TACAGAATTC CTCTGGGTCG CATGCTGGGT GATGAAGGAT TGGGCATTTA CGCAATACCC AATCAATTTT ACTATCTTCT GTTCACCATT TCCACTGCCG GCATCCCCGT AGCAGTGGCC AGGCTGGTTT CTGAGAAAAT TGCTTCCGGC CAGTACAGGG ACGCTTATAC AACCTTTAAG CTGGCGCGGG CCGCTATGCT GTCCATCGGT TTATCTTTCT CTTTTCTACT GTTCTTCGGC GCCGAGTGGC TGGTGGAAAC AGGTATTGTG GCTACCCCGG ACAGTTTTTA CGGGCTCAGG GCTGTGGCAC CTATAGTTTT TTTTGCCGCC ACCACTTCCG CCTACCGCGG CCTTTTTCAG GGGATGCAGA ACATGACAGT AGTTGCCGTC TCCCAGATAG CAGATCAGGT ACTGCTGGCT ATTGGCACGG TCACTCTAAG TTACCTTCTA TTACCCAAGG GACTGGCTAT AGCAGCAGCC GGAGCCAATT TAGGAGCCCT GCCGGGTGCC GTATTAGCTG CCATGATTAT GCTTTACTAC CACTGGAGGG AACGGCATAA TTTCAAAGAG TGGCAAAATA CAGTTACCAC TAAGGCCAAG AACTCGAACT GGGATATCTT TAAAGAAATA TTTGCCACGG CTCTGCCAAT TTCCTTTGCC AGTGTTGCTC TGTCTATAAC AGGAATCATA GACAATAAGC TGATTATTGA CCGCCTGCAA TTAATAGGCT ATACACAACA GCAGGCCACG GCTTTTTATG GGCAGTTTAA CCAGATGGCC ATGTCCTTTA TAAATATCAC CATTGCCTTT GCCCTGTCAA TGGGAACGAG CCTGGTTCCA TCTATAGCTG AAGCCTATGC AATTAAAGAT TATGAAAAAA TCAGGCAGCA AGCTGCTCAG GGTGTAAGGC TGGCTACCAT TTTTGCACTG CCGGCAGCAG CGGGACTGTT CGTGCTGGCC CCTCACCTGA CCCTTTTTAT ATTTAACAAT GAGCCGGCGG GCGTTCCCCT TGCTTATGTA GCTTTCAGCA TCGTATTCTG GTCAATACAC CTGGTAACTA CCGGAGTGCT CCAAGGAATA GGCAAAATAT CTATTCCGGT CAGAAATTTA TTAGTTGGGA TAATCTTTAA AATTGGTTTT ACTTATTACC TCACCCCAAG TCCATTAGGA ATCAGAGCAG CAGCAATATC CCAGGTAATA ATGTTTGTTA TATCATCAAC TCTCAATATT GCTACTATTG CCAAGTATGT CGGCTTTAAT TTTAAATTTA AAGCAACTAT TGTTAAACCC GGTCTGGCCA CTTTATTAAT GGCAGCCTGC GTGTGGGAGT CTTATCATCT AGTAATTACA TACACCCAAA GCAACGGAAT GGCCACAATC ACAGGTATTA TTATCGGAGC AGCTATCTAT GCTTTAACGG TAATACTAGG TGGTATTCTA ACCGCCGAGG AACTGGGGAG AATACCTAAA TTAGGCCACT TAGCGGCCAA AACGGCCAGG ATTTTCAACA AAGCCTAA
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Protein sequence | MSISVNKQSY LKGALILTTA GILIRFLGAA YRIPLGRMLG DEGLGIYAIP NQFYYLLFTI STAGIPVAVA RLVSEKIASG QYRDAYTTFK LARAAMLSIG LSFSFLLFFG AEWLVETGIV ATPDSFYGLR AVAPIVFFAA TTSAYRGLFQ GMQNMTVVAV SQIADQVLLA IGTVTLSYLL LPKGLAIAAA GANLGALPGA VLAAMIMLYY HWRERHNFKE WQNTVTTKAK NSNWDIFKEI FATALPISFA SVALSITGII DNKLIIDRLQ LIGYTQQQAT AFYGQFNQMA MSFINITIAF ALSMGTSLVP SIAEAYAIKD YEKIRQQAAQ GVRLATIFAL PAAAGLFVLA PHLTLFIFNN EPAGVPLAYV AFSIVFWSIH LVTTGVLQGI GKISIPVRNL LVGIIFKIGF TYYLTPSPLG IRAAAISQVI MFVISSTLNI ATIAKYVGFN FKFKATIVKP GLATLLMAAC VWESYHLVIT YTQSNGMATI TGIIIGAAIY ALTVILGGIL TAEELGRIPK LGHLAAKTAR IFNKA
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