Gene Dtox_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1757 
Symbol 
ID8428723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1856674 
End bp1857882 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content46% 
IMG OID645034090 
Producttryptophan synthase subunit beta 
Protein accessionYP_003191237 
Protein GI258515015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013956 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGC AATTTCCTGA TGAAAGAGGT TATTATGGAA CTTATGGGGG CATGTTTGTG 
CCGGAAACTT TAATGCCGGC TCTGGAGACC CTGACCAGTG TTTACAAGGA AGCTATGCAT
GATCCGGTGT TTTTAGGAGA ATTGAAATTT TATTTTAAAA ATTATGTAGG CAGACCTTCT
TTGCTCTATT ATGCGCAAGG ACTGACCGAA TATCTGGGTG GAGCCAAGAT ATATTTGAAG
CGAGAAGATT TGAATCATAC CGGTGCACAT AAGATCAACA ACACTATTGG CCAGGCATTA
CTGGCTAAAA GAATGGGGAA ACGCAGGATT ATTGCTGAAA CCGGTGCCGG TCAGCATGGA
GTGGCTACAG CTACAGCAGC AGCACTTTTA GACTTTGATT GTGTAGTATA TATGGGAGAA
GAAGATACCC GCAGGCAGGC TCTAAATGTA TTCCGGATGG AATTGCTGGG GTCAAAAGTA
GTTCCAGTAA AGACTGGAAG CCGTACTTTA AAAGATGCAA TGAATGAAGC AATGCGTGAT
TGGGTGGCTA ATATTGAAGA TACTTATTAT GTTATCGGGT CCGTAGCAGG TCCCCACCCA
TATCCTGCGA TGGTAAGGGA TTTTCAGGCT GTTATAGGCG AGGAAACCAG GGCGCAGATT
ATGGAGGCGG AAGGCAGATT GCCCGATTAT GTGATAGCCT GTGTAGGCGG CGGCAGCAAT
GCTATGGGTA TGTTTCATCC TTTTAAGGAA GACACGGAAG TTAAGCTCAT TGGGGTGGAG
GCTGCAGGAC ACGGTACAGA AACTGATATG CATGCGGCTA CTATATCTAA AGGCATACCT
GGTGTTTTAC ACGGTTCACT AAGCTATTTG CTGCAAGATG AATACGGCCA GATTGCCCCG
GTGCATTCCG TATCTGCCGG TCTGGACTAT CCCGGAGTGG GTCCTGAACA CAGCTATTTG
AAGGATTCAG GACGGGTGAT TTATACTAGT GCTACAGATA AAGAAGCACT GGATGCGTTT
CAAATTTTGT GTCGTACAGA CGGAATTATT CCGGCCTTGG AAAGTTCCCA CGCTTTAGCT
GAGGTGATTC GACTGGCACC CGGTCTTTCC GCGGATAAAG TTGTTGTGGT CAACCTGTCG
GGACGTGGTG ACAAGGATGT TCAGACTGTT GCCGAGATAT TGGGTAACCT GAACCAGGCA
GCAGAGTAA
 
Protein sequence
MFEQFPDERG YYGTYGGMFV PETLMPALET LTSVYKEAMH DPVFLGELKF YFKNYVGRPS 
LLYYAQGLTE YLGGAKIYLK REDLNHTGAH KINNTIGQAL LAKRMGKRRI IAETGAGQHG
VATATAAALL DFDCVVYMGE EDTRRQALNV FRMELLGSKV VPVKTGSRTL KDAMNEAMRD
WVANIEDTYY VIGSVAGPHP YPAMVRDFQA VIGEETRAQI MEAEGRLPDY VIACVGGGSN
AMGMFHPFKE DTEVKLIGVE AAGHGTETDM HAATISKGIP GVLHGSLSYL LQDEYGQIAP
VHSVSAGLDY PGVGPEHSYL KDSGRVIYTS ATDKEALDAF QILCRTDGII PALESSHALA
EVIRLAPGLS ADKVVVVNLS GRGDKDVQTV AEILGNLNQA AE