| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1677 |
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| Symbol | |
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| ID | 8428643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 1765192 |
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| End bp | 1766730 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 645034010 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003191157 |
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| Protein GI | 258514935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00717505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATA TTCAAACTAT ATTAAGCGGT TTTTTAATGG CATCTGCTAT GTTCACTTTT
TTTGTTTTTA TCTATATGTT TAAGCAGAAT AATTATATTA CAAAATATTT CGCATTTTTT
TGTCTAAGCA TAACAATATA TTCCTTTGGA TACTCTATGG AGCTTTATGG TAACAGATTT
GATAAAATGC TTTTTTGGAA TTATATTCAA TATTTGGGTT TGCCATTCTT ACCTGCGTTG
TGGTTAATAT TTAGTTTGGA ATATAATAAT AAGCGTACCA AAACTGCAAT AAAGGCGGGT
ATATTTTTAA TACCGATTTT AACTCTCTTT TTTCGGTATA CAAGCAATTT AAATCATCTT
TTTTATGTAA GTGTGCAAAA AACCACTAAT CTTTTTTTTC CTGTACTATA TATTGTGAAG
GGTCCCTGGT ATTGGGTTCA TGCAATATAT ACAACATCGT GTTTTATTGT TGTGAATTAT
GTGTATTTTT TTACGTATAG GAAATCAACC GGATCCATTC GCCGTCAATG TTTACTTTTG
CTGATTGCTT CACTTTTTCC CTGGATTTCT TACTTGCTGG ATTTATTGAA TATATCGCCT
TTGAATATTG ATTGGGGTGC CTTTGCAGTC ACTTCTTCAG TCGCTATATT TTTAGTGGCT
TATTTAAGAT ACCAGTTTCT CAATATAAAA CCTTTAGCCA GAGATAAAGT TTTTGAATCC
ACAAATGATG GTATTATTGT ATTAGACGCT AATAATAATG TTATCGACTT TAATCCCTCG
GCGGAGGTTA TTTTTCCCGG TCTTGATGAG AATTGTATAG GTAAAAATAT ACGAATGGTA
TTTGAAACGA ATGAAAGATT GGTTGATTCG ATTCTTAATT GTGTGGAATT TCAATATGAA
AGTCTAAGCG ATTATAAGAA AAATTATTAT AGGGTTCAAA CGGTAAAGAT ATTAGAATCA
AGAGACAGGG GGGTCGGTTT TCTTATAACC TTTAATGATA TTACAAAGTA TATGAATATG
ATGGAAGAAC TAAATCACCT TGCTTCGAGA GATGCCCTGA CCGGTGTTTA TAACAGAAGA
TATTTTGCCG AACTTAGTTC TTTGGAATTA TCGAAATCAA GGCGCTATAA TATGCCTGCT
TCATTAATTA TCCTCGATCT TGATTTTTTT AAGCAGATTA ATGATAATTA TGGTCATCAA
GCCGGTGACA CAGTACTCAA GGAGATTGCA GATATCTGCC GCAAGTCTAT TCGTTCCATT
GATATTTTAG GCCGGTACGG TGGTGAAGAA TTTGTTATCT TTTTACCGAA TACAAAATTG
GAAGACTGCC GGATGGTTTC CAATCGAATT TTAAACAATA TTGCATCGGC AGTAATATGT
TATGAAGGGA AAAGTATAAA AGTTACAGCA AGTATAGGGA CTTCCGGTGT GGAGTTTGTT
TCTGATGAAA ATTTAGACCA TTTTCTGAAA ACTGCTGACC AGGCGTTATA TCAGGCGAAG
TTAGATGGAC GTAATTGCTT GCGTTCGAGT GGAGGTTAG
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| Protein sequence | MEHIQTILSG FLMASAMFTF FVFIYMFKQN NYITKYFAFF CLSITIYSFG YSMELYGNRF
DKMLFWNYIQ YLGLPFLPAL WLIFSLEYNN KRTKTAIKAG IFLIPILTLF FRYTSNLNHL
FYVSVQKTTN LFFPVLYIVK GPWYWVHAIY TTSCFIVVNY VYFFTYRKST GSIRRQCLLL
LIASLFPWIS YLLDLLNISP LNIDWGAFAV TSSVAIFLVA YLRYQFLNIK PLARDKVFES
TNDGIIVLDA NNNVIDFNPS AEVIFPGLDE NCIGKNIRMV FETNERLVDS ILNCVEFQYE
SLSDYKKNYY RVQTVKILES RDRGVGFLIT FNDITKYMNM MEELNHLASR DALTGVYNRR
YFAELSSLEL SKSRRYNMPA SLIILDLDFF KQINDNYGHQ AGDTVLKEIA DICRKSIRSI
DILGRYGGEE FVIFLPNTKL EDCRMVSNRI LNNIASAVIC YEGKSIKVTA SIGTSGVEFV
SDENLDHFLK TADQALYQAK LDGRNCLRSS GG
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