| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1676 |
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| Symbol | |
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| ID | 8428642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 1761679 |
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| End bp | 1764744 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 645034009 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003191156 |
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| Protein GI | 258514934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.267843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACTATGG AATCAATTAA CTTAAGTCAA TACCTTAATT TAAATATAAA TACTAAAAAA
ACAGGGCAAA TTATTATAGA TAAGACAACT AACAAAATAA TTGCATTAAA CAACGTCTTA
ATTGAGTGGC TGGGATATGA AAAGAAGGAA TTATTAAATT GCAGTATTGA AGATTTCATA
GAAGTATTTG AACAGAATGA AACCCTTGTG TCAAGACTTA TTAAAAAAGA CGGTACATTT
GTGGAAGCAC AACTTTCCGC AACTTTCATG GAAAATAATA ATAAAGAATA CTATTTGTTG
GAAATTAAAA ACAGTAACCA GCAACATCAG GAAGACCAGT TGAATTTCCT GCAACAATTA
ATAGATATAA TACCCAGTCC CGTCTTTTTC AAGGACATAA ATGGATTATA TCAGGGATGC
AATAAAGCTT TTGAAAACTA CATAGGCCAT TCCAGAGAGG AATTGCTGGG TAAATCAGCA
TATTACATAT CACCTAAAAA TTTAGCTGAC AAATATTTAG CAAAAGACAA AGAGTTATTT
AAAAATAAAG GTGCAGAGGT ATTTGAATCA AGCATTTTAT ATGCTGACGA CAGCCTGCAT
GAAGTTATTA TTAACAAGGC TGTCTACTTT GATAATGAAA ATAAAGTAGC GGGTTTAATA
GGAATTATTA CTGATATTAC CGAACTCAAG CAGTTTGAAA GAAAACTTAA GCAGACAGCA
GAGCGTTTTC GCTCCATTTA TGAAGATGCA GCTATTGGCA TTGCAATTGT AAACGAGCAG
GGTCGCTTCT TGCAATGCAA TGCACAGTTT CAAAAGATGC TGGCCTACAA TGAAAATGAA
CTCCGCGATA AGCTTATCAG CGATATAACT CACCCAAATG ACATCTCAAT AATGAACTTT
CTGTATCAAG AACTTTTTTC AGGGAGACGC ATGAATTATC AAACTGAGAA AAGATATATT
CGAAAAGACG GCCAGCTAAT ATGGGTTCGA CTCACAGCTT CTCAGGTGCA AACGGCTCCC
GGTGAACCAA AGCTGGTAAT TGGTATGGCG GAGGACATCA CCAAACATAA ACAAGTGGAA
AAAGCTCTTA TAACTGAACG CAAGAGGCTT TTTTCCTTAT TGGACGAATT ACCGGCTGCT
ATTTTTTTGC TGGCTAAAGA TTATACCATT CGCTATTCTA ACCGTTTATC TCTGAAACAA
TTTGGGAATC CCGGTACCAA ACGATGCTAC GAGCATACTT TCGGATTAAG CAAACCTTGC
AAGAACTGCA TCCCCTTTAA AGTATTTGAA AACAATACGC TTACACAGCA TGAGTTTAAA
GATAAAAATG GACGCAAATA TCATTTTTAT AATTATCCCT ATACAGATGT GGATGGGTCT
TCCCTGGTTT TAAGTTTATG TATAGATATA ACGGATCGCA AACAGGCTGA AGAATTTTTT
AAAAAATATA AAATACTTTC TGATTGCGCG CATGATTTTT TTCTTTTTAT CAACGGTAAC
AAAAAAATTA TAGAGGCTAA TCAGGCAGCA GTGGAAGCAC TAGGTTACAG CCGTGATGAT
TTGCTAACTT TAAATATAAA CGACTTGCTT GCACTGGAAG CTTTGAAATT AAACAAAAAC
CAAATGGAAC AGGCTTACCA AAATGGAATT TTGTTTGAAA CAGTGGCAAA AAGAAAAGAT
GGCAGTACTT TCCCAATAGA AGTAAACTTG AGAGGTACTT TTATTGGCAA TGAGCGCGTT
TTTTTGAGTG TTGGGCGTGA TATAACAAAC CGTAAAAGAT TTGAACAAAA ATTGCAATAT
TTAGCTAGCC ATGATCCATT AACGAACATT TCCAATAGGT ATTCCCTGGA GGAATATCTG
ACCAGATTTG TAGCCAAAGC CAAACTAGGC AGGACAGGTG TTCTCCTGCT AATTGATCTG
GATAACTTTA AAATGGTCAA CGATACTTAT GGTCATGCTG CAGGCGACGA GGTGCTGATA
GCACTGGTTA ATACTTTAAG ACTCAATCTG AGAGAAGAAG ATTTTATTGC CCGGTTTGGC
GGAGATGAAT TTGTAGTCTT ATTAGATAAT ACGACAGTAG CGGAAGCTAT GCTCATTGCT
GAAAAACTGC GCAATGCGGT TGATAATAAT GCTTTTTGCC TCTGTACCTT CAAAACTTGT
TTTAACTTAA CTATCAGCAT TGGAGCGGTT CTAATTGACG GCAATCAGGA TGCTCAAAAA
TTACTTTCTA TTGTAGATGC AGCTCTTTAT GTGGCAAAAG AAAGCGGGAG AAACAGCATT
AAATACTTGG AAGCAGATGA GTTTTCCAAA TACGTTTATG CGGAAACAAA CGAAATAATT
GGTCTCATCA AGCAGGCATT AAGAGAGGAC AAGTTTATAT CATACTATCA ACCGGTTGTA
AAAATAGATA ACGGTACTAT AGCGCACTAT GAGGCTCTTA CCCGTCTTAT CGGTAAAAAT
AGGGAAATAA TTCTTCCCGG CATATTTATT CCCGTTGCTG AGCGATATGG ATTAATGCCC
CAGATTGATC AATGGGTTGT CCGAAATTCA TTGGCTGCCC TTGTGCAAAA TCCTGAAATC
AAAATTTTTA TCAATATTTC GGGTATGAGT CTGGGCCAGG ATACTTTGCT TGAATCTATA
GAAAAGCAAA TTCGGGATAG TAAAATTGAC CCTTTACGAC TGGGCTTTGA GATTACAGAA
ACAACCGCCA TTAAAGATCT GCCACGTGCA GAAAGATGGA TTCGCAGGTT AAAGAAATTA
GGTTGCCAGT TTGCCTTAGA TGATTTTGGT ATGGGATTTT CCTCTTTTTC TTATCTCCGT
GTATTACCGG TGGACATAAT AAAAATTGAT GGTTCTTTTA TTCGCGATAT TAACGATAAT
CCGACTCAAC ATGCCATACT CCAGGCTATA ATCAATATAG CACGTACTCT CGGTAAAAAG
ACTATTGCCG AGTACGTGGA AAACAAGGAA ATTTTACAAT CTCTTCATAA GTTAAATATT
GATTACGGTC AGGGGTATTT TCTTGGTAAA CCTGCTCCAG AGTTCCAAAA TAGCTCTCGG
TATTGA
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| Protein sequence | MTMESINLSQ YLNLNINTKK TGQIIIDKTT NKIIALNNVL IEWLGYEKKE LLNCSIEDFI
EVFEQNETLV SRLIKKDGTF VEAQLSATFM ENNNKEYYLL EIKNSNQQHQ EDQLNFLQQL
IDIIPSPVFF KDINGLYQGC NKAFENYIGH SREELLGKSA YYISPKNLAD KYLAKDKELF
KNKGAEVFES SILYADDSLH EVIINKAVYF DNENKVAGLI GIITDITELK QFERKLKQTA
ERFRSIYEDA AIGIAIVNEQ GRFLQCNAQF QKMLAYNENE LRDKLISDIT HPNDISIMNF
LYQELFSGRR MNYQTEKRYI RKDGQLIWVR LTASQVQTAP GEPKLVIGMA EDITKHKQVE
KALITERKRL FSLLDELPAA IFLLAKDYTI RYSNRLSLKQ FGNPGTKRCY EHTFGLSKPC
KNCIPFKVFE NNTLTQHEFK DKNGRKYHFY NYPYTDVDGS SLVLSLCIDI TDRKQAEEFF
KKYKILSDCA HDFFLFINGN KKIIEANQAA VEALGYSRDD LLTLNINDLL ALEALKLNKN
QMEQAYQNGI LFETVAKRKD GSTFPIEVNL RGTFIGNERV FLSVGRDITN RKRFEQKLQY
LASHDPLTNI SNRYSLEEYL TRFVAKAKLG RTGVLLLIDL DNFKMVNDTY GHAAGDEVLI
ALVNTLRLNL REEDFIARFG GDEFVVLLDN TTVAEAMLIA EKLRNAVDNN AFCLCTFKTC
FNLTISIGAV LIDGNQDAQK LLSIVDAALY VAKESGRNSI KYLEADEFSK YVYAETNEII
GLIKQALRED KFISYYQPVV KIDNGTIAHY EALTRLIGKN REIILPGIFI PVAERYGLMP
QIDQWVVRNS LAALVQNPEI KIFINISGMS LGQDTLLESI EKQIRDSKID PLRLGFEITE
TTAIKDLPRA ERWIRRLKKL GCQFALDDFG MGFSSFSYLR VLPVDIIKID GSFIRDINDN
PTQHAILQAI INIARTLGKK TIAEYVENKE ILQSLHKLNI DYGQGYFLGK PAPEFQNSSR
Y
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