Gene Dtox_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1517 
Symbol 
ID8428474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1568994 
End bp1570232 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content41% 
IMG OID645033848 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003191004 
Protein GI258514782 
COG category 
COG ID 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.5366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATA AGAATAATAA TCAATTAAGC AACAAGGATT GGAAAAAAGG ATTCCTTACT 
ATTATAAGCG GGCAAACAAT ATCCATTATT GGTAGCAGTG CGGTGCAATT CTCGTTAATT
TGGTGGTTGG CCACTGAAAC TTCTTCGCCG CTCATGATGT CATTCGCAGG CTTGTTTGCA
TTTTTGCCGC AACTCATATT GGGGCCATTT GCAGGTGTTT GGGTTGACCG TCTGAAGAGA
AAAACTATCA TCATTTGCGC TGATTTGTTT ATCGGTCTTG TTGCTGCATT TTTTGCAATT
TCATTCATTA TATGGAACCC ACCATTCTGG ATGGCCTGTA TGGTACTAGG TATTCGTGCG
GTTGGAAGTG TTTTTCACAC ACCAGCAATT CAAGCTGTTG TGCCTATGCT CGTTCCTAGG
GAAGAACTTA TCCGAGCAAA CGGGTGGAAC CAATTTATGC AATCGGGAGC ATACATGCTC
GGCCCTGTCG TGGGCGCCGC CATGTATGCA TCATTACCAT TACCTATTAT CCTGATTTCT
GATCTTGTTG GCGCAATAGT TGCAAGTGTA TCAACTGCCA TAGTAAAAAT CCCCGAAATC
GAACATGAAA AGCAAATCCG CCCGAATTAT TTAGGCGAAA TCAAGGAAGG GTTTCAAGTA
TATGTGAGCG ACAAAAGGCT TTTCAACGTT ACAATTACTA TGATGGTCAG CATGATCTTC
TTTATGCCCC TAGCATCATT GTATCCTCTT ATGATAAGTG ATTATTTTAA GGCTACTGCT
TGGCATGCTA GCATTAATCA AATTTCGTAT GCTGTCGGTA TGATGATTGG AGCTGCTATT
ATAAGTAGTA TCGGAGTAAT AAAAAACAAG CTAGGAATAG TACGCATTGG AATTGTTGCT
TTAGGTGTAA CATCGATTCT CAGCGGAATT CTACCGCATA ACTTAACAGG ATTTTGGTTT
TTCACAGCAG TGTGTTTGGT TATGGGAGCT GTTGGGAATG CCTATAGCAT TCCATATGCA
GCTTATTTAC AGGAAACCAT ACCAAAAGAG GCACATGGCC GGGCATTTTC GCTCATGGGC
AGCTTAATGT CGGTAGCAAT GCCTATCGGA TTGTTGATCG CGGGGCCGAC TGCTGAACGT
TATGGTGTGC CTGTTTGGTT TGTTATTGCG GGAATAGCCA TAATAATTAT TACTGGTATA
AGCATAGCTT TATCAGTTTC AATTAATGTC TCAACATAA
 
Protein sequence
MDNKNNNQLS NKDWKKGFLT IISGQTISII GSSAVQFSLI WWLATETSSP LMMSFAGLFA 
FLPQLILGPF AGVWVDRLKR KTIIICADLF IGLVAAFFAI SFIIWNPPFW MACMVLGIRA
VGSVFHTPAI QAVVPMLVPR EELIRANGWN QFMQSGAYML GPVVGAAMYA SLPLPIILIS
DLVGAIVASV STAIVKIPEI EHEKQIRPNY LGEIKEGFQV YVSDKRLFNV TITMMVSMIF
FMPLASLYPL MISDYFKATA WHASINQISY AVGMMIGAAI ISSIGVIKNK LGIVRIGIVA
LGVTSILSGI LPHNLTGFWF FTAVCLVMGA VGNAYSIPYA AYLQETIPKE AHGRAFSLMG
SLMSVAMPIG LLIAGPTAER YGVPVWFVIA GIAIIIITGI SIALSVSINV ST