| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1378 |
|---|
| Symbol | |
|---|
| ID | 8428327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 1409607 |
|---|
| End bp | 1410746 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645033713 |
|---|
| Product | HtrA2 peptidase |
|---|
| Protein accession | YP_003190877 |
|---|
| Protein GI | 258514655 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000000042799 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTATTTA AAAACAGAAA AATAACTTTA ACTAATTTAC TTCTGGTTAT CCTGATCTTC
ACTGTCATAG CCGCTACGAT CACAGCCAAA AGGTCTTCCG CCGAAGAAGA CACAGGCAAT
ACGGCACAAA CCATCAGCAT GCCGGCAGTC GGCCCAAACA CCATAGCTGA TATGGTGGAT
AAAGCCAGTT CAGCAGTGGT AAAAATAAAC ACCACCGTTG AGCAGCAGGT TACCGGTGTC
AATCCCCTGT TTAGTGACCC GTTCTTCAGG GAGTTTTTCG GTCATCAATA TCAAGTGCCG
AGCAGAACCG AAGTACAGCA CGGTATTGGC TCCGGCTTTA TTATTTCTAA AGAAGGCTTG
ATTTTGACCA ACGAGCATGT CATCGACGGC GCCAGCAAGA TAGAAGTATT ACTGGATAAT
GATAAAAATC CCCTAACCGC CAAACTGGTT GGTAAAGATA AAGATCTGGA TTTAGCCGTG
TTAAAAATTG AACCGACTAA GGATTTACCG GTTTTAAAGC TTGGCAATTC CGACAATACC
AGGGTTGCTG ACTGGGTAGT GGCTATCGGT AATCCTTACG GGCTTGATCA TACTGTAACT
GTAGGTGTGG TCAGCGCTAA AAGCCGCCCG GTGGATATTG AAGACAGGCA TTATAAAAAC
CTATTGCAAA CTGACGCATC CATTAACCCC GGCAACAGCG GCGGCCCGCT CCTCAACTTG
AAGGGCGAGG TAATCGGTAT AAATACAGCC ATCAATGCCA GCGCGCAGGG TATCGGCTTT
GCTATACCCA GCAATACTGT CCAGGCAGTA CTAAATGATC TGGAAACCGG ACAATTGAAG
CATCCCTGGC TGGGAGTATC TGTACAGGCA TTAACTCAGG AGCTGGCTGA CGCTCTGGGC
TTGCAAAACA CTCAGGGAGC GCTGGTCGGC AGTGTCTCTT CCGGCGGCCC GGCGGAAAAA
GCCGGACTGC AGAGGGGGGA TGTTATTATC AAGTACAATG ATACACAAAT CGATAATGAA
CAAAAGCTGA TTGATTGCGT TCAGAAAAGC AAGGTGGGAG ATACCGCCGT AATGGTAGTT
GTCAGAAACA AAAACAATAT TTTTCTGACG GCAACTATTG AGGACAAGAA CAGCCAGTAG
|
|---|
| Protein sequence | MVFKNRKITL TNLLLVILIF TVIAATITAK RSSAEEDTGN TAQTISMPAV GPNTIADMVD
KASSAVVKIN TTVEQQVTGV NPLFSDPFFR EFFGHQYQVP SRTEVQHGIG SGFIISKEGL
ILTNEHVIDG ASKIEVLLDN DKNPLTAKLV GKDKDLDLAV LKIEPTKDLP VLKLGNSDNT
RVADWVVAIG NPYGLDHTVT VGVVSAKSRP VDIEDRHYKN LLQTDASINP GNSGGPLLNL
KGEVIGINTA INASAQGIGF AIPSNTVQAV LNDLETGQLK HPWLGVSVQA LTQELADALG
LQNTQGALVG SVSSGGPAEK AGLQRGDVII KYNDTQIDNE QKLIDCVQKS KVGDTAVMVV
VRNKNNIFLT ATIEDKNSQ
|
|---|
| |