| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1375 |
|---|
| Symbol | |
|---|
| ID | 8428324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1406134 |
|---|
| End bp | 1407342 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645033710 |
|---|
| Product | proposed homoserine kinase |
|---|
| Protein accession | YP_003190874 |
|---|
| Protein GI | 258514652 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
|---|
| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form
[TIGR02535] proposed homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0348409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000388433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT TGATACTTTT AGGTGACGGT ATGGCCGATT ATAAAATACC TGAGTTGGGA
GATAAAACAC CACTGCAATA TGCTAAAACG CCGCATATGG ATTACCTGGC TGCCAACGGA
GAAATAGGCC AGGTCTGGAC GGTGCCTGAG GGTTTTCCTC CGGGAAGTGA CGTGGCCAAC
CTCTCAGCTA TGGGCTATAA TCCTAAAACT TGCTACTCGG GCCGCTCACC GCTGGAAGCT
TACAGCATGG GTATTATCAT GAGTGAAACC GATGTTTCTT TTCGCACCAA TCTGGTCACT
CTGACCGAAG AGCCGGAAGA ATACGAGCAA AAAACTATTC TCGACCATAG TTCAGATGAA
ATAACTACGG AAGAAGCCAG GGAGTTAATA GGGGAAATAA GAAAACACCT GTCTACCGAA
GAATTGCAGT TTTTTGCCGG TATCAGCTAC AGGCATTTAT TGATATGGAA GAACGGGCAC
CTGGATATAG AACTGACACC GCCTCACGAT ATACCCGGGA GATGTATTGC GGATTACCTG
CCCAAAGGCC CGCACAGCCG GGTACTGTTG GAGATGATGA AAAAGAGCTA TGTTTTGTTG
AATGATCACC CGGTAAACAG GAGCAGGCGC AGGAATAACC TGCGTCCTGC CAATTCCATT
TGGTTTTGGG GTGAAGGCAA GAAGCCCTCA ATGGAAAACT TTTATAAGAA ATACGGGCTT
AAAGGCTCAG TCATTTCAGC TGTTGATTTA ATCATGGGAC TTGGCAAGTG TGCCGGCATG
GATGTGGTTA AAGTGGAAGG GGCGACGGGC GGTACACATA CAAATTTTAG AGGAAAGGCT
CTGGCTGCTC TGGAGGAACT GAAGAAAGGC AAGGATTTTG TTTATATTCA CGTAGAAGCC
CCGGATGAAG CCGGACACAG GGGGGAACTG GATACCAAGA TAAAAACCAT AGAAGAAATA
GACGGGCAAA TGCTGTCTGT TTTGCTGCCG GGGCTGGAGG AATTCGATGA TTACAAAATA
ATGCTGCTTC CGGATCATCC TACCCCGCTG GCTATCAGAA CGCACACCAA AGACCCTGTA
CCCTTTGCTA TTCTGCGCAA GGGTGTGAAG AAACAGAGCA ATGTCACCTA CTGTGAAGAG
GATGCAGCGA AAAGCGGCTT AAAATTTGCT GCCGGGCATG AGTTGATGAA TTACTTTATC
AACGGTTAA
|
|---|
| Protein sequence | MKYLILLGDG MADYKIPELG DKTPLQYAKT PHMDYLAANG EIGQVWTVPE GFPPGSDVAN
LSAMGYNPKT CYSGRSPLEA YSMGIIMSET DVSFRTNLVT LTEEPEEYEQ KTILDHSSDE
ITTEEARELI GEIRKHLSTE ELQFFAGISY RHLLIWKNGH LDIELTPPHD IPGRCIADYL
PKGPHSRVLL EMMKKSYVLL NDHPVNRSRR RNNLRPANSI WFWGEGKKPS MENFYKKYGL
KGSVISAVDL IMGLGKCAGM DVVKVEGATG GTHTNFRGKA LAALEELKKG KDFVYIHVEA
PDEAGHRGEL DTKIKTIEEI DGQMLSVLLP GLEEFDDYKI MLLPDHPTPL AIRTHTKDPV
PFAILRKGVK KQSNVTYCEE DAAKSGLKFA AGHELMNYFI NG
|
|---|
| |