Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1347 |
Symbol | |
ID | 8428296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1373726 |
End bp | 1376599 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645033683 |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_003190847 |
Protein GI | 258514625 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.579486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGGAAA ACTTTGTCGT AGCCCATATA ATTACCACTG GTAATGACCC CCTAAAAGAA GACGTTATCG AAACAAGCCT GGTCAGAGTC AGCGGCTCTC AAATAGCGGA AACAATTTCT TTTTACAGCA AGCCTGCCCG TAAACTGCCT GTAAGGGTTA AAAATATAAC CGGACTTTCT GATGAGACTC TGGCAGATAA ACCTTTTTTT AACGAGCTGC TGCCGGAAAT ACTGAGTTTT ATCGGAGCTT CAACCCTGGT CAGCTGTGAA GCGGATTTAA TATATATCTT TTTTTCGGCC GCGGCAGGTT ACCCACTGCC TAATCTTTGT TTGGATGTTG TACAATTGGC TCAGATATTA TACCCTACTT TAATTAATTA CCGGCTGGCT AATCTCTATG AGTATTTATT TAATACGGAT GACATTTTAT CTTCGTCTGA TAATATTTTG GCCGGAGAAA TGGCTTTGTT GACGGCCAGG GTTTTTCTAA AGCTCCGTGA GGGTTTTCGA GGAATGGAAC CTGAGCTGTT AGTAAAATTA AATAATATTT TAAATAAAAC TCCGGAAAGC CCTTTAATCA ACTTTATGCA AGGCCTAACC GCCGGTGTAG TAAAAAACTA CTTCCTGTCT GGCAGGCCGT TGGTCGGCAC TGATTTACAG ACTAACGCAG TGCTTGAAGA TGAACAGAGC TCGTTCTTTG AGTCCTCAAA TGAAACTGTA CAAGTGTATG TCTCTAATTT GAATCAAAAA CAAGTAGTTG ATATCCTGGG CCCGGAAGGG GAGTTGGCCA AACAGCACCC TCATTATGAG CACCGTCCCC AACAGTTGCA AATGTCTGTG GCAGTAGCCC AAACACTTAA CAAGCAGTCC CTGCTGCTTA CCGAAGCAGG GACCGGTACC GGTAAATCAA TGGCTTACCT GGTGCCCGCT GTATTGTGGT CCGCACAAAA CCGGGAGAGA GTAGTCGTTT CAACTCACAC GATAAACCTC CAGGAACAGC TATGGTTTAA GGATATTCCA ATGTTGCAAC AGATGTTTGG GAAAAGCTTC CGGGCAGCCT TGGTCAAGGG AAGACAAAAT TACCTGTGTC TTAGCCGGTG GTCTGAAGTA TTTTCAAGCA CGGATAATCA TAGTCGCTGG GAAGCCTTGT TTTACAGCCG TATTCTGGTT TGGTTGACAA AAACACAGAC CGGAGATCGC AGTGAGATTA ATTTAAACGG TGCGGAATAT GATTACTGGT CAAAAATTTC GGCTGACAGT GACAGGTGTA AAGGCAATCA ATGTCACTGG TTTCAAAAAG CCTGTTTTGT CAGCAGAGCT AAAAAGACAG CGGAAAACTC GGACCTGATA ATTATCAATC ACTCTCTTCT ATGTTCTGAT TTGCAGGTGG AAAATCGAAT TTTACCGTCT TATGGGCCGC TGGTAATTGA TGAGGCACAT CACTTAGAGA ATGTTGCCAC AGAGCATTTT GGCTATATGA TTTCCGAAAG CAGTATCAAG CGCTGGCTGG AAAGTACAGA TAAACTGGCA ATTAAGCTTT CTCACAATCC GGCTGCGGAG GCAAATAATA ACTTCGACCA GAAAATTTAT GCTGTTCGTA AGTCTGTTGA GGATATCCGT CATGCGTCCG GAGTATATTT TAACTTATTA AGAACCGAAC ATAGTATCAA TGATTATGCT GAAGAACCTG TAGAAGCGGC AAACCAAAAT GCAGGCGGTT TATGCGTCAG CAGACTTTAT AAAGAAGCCG GTCAAGAACA ATTGTTAGTC GAAGAGGACA ACTTATTAAC CGGATTTAAA ATTCTCATGG ATAATCTGAA GAAAATAATG TTGAAGCTTG AAATCTGGGC TGCACAGTAT GAGAAGTGGG TTAACACGGC GAAAATATTT TCACTGCATT TAAACCTGGG AACGCAGCTT TTTGCTTCCA TAGAGTTTAT TCTAACCCAC AGTGATCCAA ATTTTGTTTA TTGGATGGAA AAAAATTATT TTCAAAGCAA CACTTATATA ACCCTGCGCT CTTCTCCCAT TGACATAGGA AAACTGCTTT ATGAAAAACT CTTTGCTTCT AAAAAAGCGG TAATTTTAAC TTCAGCCACA TTGTCCATTG CCGGTTCTTT TGATTATTTT AAAGAACGCG TAGGATTGAA TTTGTACACA GAAGAAATAA GTGAATTGCA AATAGATTCC CCTTTTAATT ACGGAAAGCA GGCCAAACTT TTTCTTACTT CCGATTTGCC AAGTCAAAAC GAAGTGCCTG AGCAATTCTA TCATACGGAA CTGGCGAATA TAATAGAGAA ATTGGTAAAT GTTTCGCAGG GGAAAACCCT GGTGCTTTTT ACTTCACACC GAAGCTTAAA ACAAACATAT TTACGGCTAA AGCCGGTATT GGAAGATAAG GAGATATTGT TATTAGGCCA CAATATTGAC GGATCCCGTT CAGCTTTAAT TGAAGAGTTT GTTAGAAACA AGAAAGCTGT TTTATTTGGA ACCGCAAGCT TTTGGGAAGG GATTGATATC CCGGGTGACA GTTTAAGTTC TGTGATCATA GTTAAGCTGC CGTTTTGGGC GCCCAGTATC CCTATTATTG AAGCCAGGTT GGAAAGCCTG ATCAAGCAGG GTAAAAACGG TTTTTGGGAA TTCAGCCTGC CTCAAGCAGT AATTCGTTTT AAACAGGGCT TTGGCAGATT AATTAGAAGC AGTCGAGACT ACGGAGCAGT AATTGTACTT GATAAAAGAA TTATACAGAA GAAATACGGG CGTTATTTCC TTAATTCACT TCCCTTGAAG CACCACCAGA GAGGGGATAT GGAAAACCTG CTGACTCAGA TGACTGATTG GTTGGGCAAA AAAAAGAGCA CGGTGAAAAT ATAA
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Protein sequence | MLENFVVAHI ITTGNDPLKE DVIETSLVRV SGSQIAETIS FYSKPARKLP VRVKNITGLS DETLADKPFF NELLPEILSF IGASTLVSCE ADLIYIFFSA AAGYPLPNLC LDVVQLAQIL YPTLINYRLA NLYEYLFNTD DILSSSDNIL AGEMALLTAR VFLKLREGFR GMEPELLVKL NNILNKTPES PLINFMQGLT AGVVKNYFLS GRPLVGTDLQ TNAVLEDEQS SFFESSNETV QVYVSNLNQK QVVDILGPEG ELAKQHPHYE HRPQQLQMSV AVAQTLNKQS LLLTEAGTGT GKSMAYLVPA VLWSAQNRER VVVSTHTINL QEQLWFKDIP MLQQMFGKSF RAALVKGRQN YLCLSRWSEV FSSTDNHSRW EALFYSRILV WLTKTQTGDR SEINLNGAEY DYWSKISADS DRCKGNQCHW FQKACFVSRA KKTAENSDLI IINHSLLCSD LQVENRILPS YGPLVIDEAH HLENVATEHF GYMISESSIK RWLESTDKLA IKLSHNPAAE ANNNFDQKIY AVRKSVEDIR HASGVYFNLL RTEHSINDYA EEPVEAANQN AGGLCVSRLY KEAGQEQLLV EEDNLLTGFK ILMDNLKKIM LKLEIWAAQY EKWVNTAKIF SLHLNLGTQL FASIEFILTH SDPNFVYWME KNYFQSNTYI TLRSSPIDIG KLLYEKLFAS KKAVILTSAT LSIAGSFDYF KERVGLNLYT EEISELQIDS PFNYGKQAKL FLTSDLPSQN EVPEQFYHTE LANIIEKLVN VSQGKTLVLF TSHRSLKQTY LRLKPVLEDK EILLLGHNID GSRSALIEEF VRNKKAVLFG TASFWEGIDI PGDSLSSVII VKLPFWAPSI PIIEARLESL IKQGKNGFWE FSLPQAVIRF KQGFGRLIRS SRDYGAVIVL DKRIIQKKYG RYFLNSLPLK HHQRGDMENL LTQMTDWLGK KKSTVKI
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