Gene Dtox_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1347 
Symbol 
ID8428296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1373726 
End bp1376599 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content41% 
IMG OID645033683 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003190847 
Protein GI258514625 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID[TIGR01407] DnaQ family exonuclease/DinG family helicase, putative 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.579486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGGAAA ACTTTGTCGT AGCCCATATA ATTACCACTG GTAATGACCC CCTAAAAGAA 
GACGTTATCG AAACAAGCCT GGTCAGAGTC AGCGGCTCTC AAATAGCGGA AACAATTTCT
TTTTACAGCA AGCCTGCCCG TAAACTGCCT GTAAGGGTTA AAAATATAAC CGGACTTTCT
GATGAGACTC TGGCAGATAA ACCTTTTTTT AACGAGCTGC TGCCGGAAAT ACTGAGTTTT
ATCGGAGCTT CAACCCTGGT CAGCTGTGAA GCGGATTTAA TATATATCTT TTTTTCGGCC
GCGGCAGGTT ACCCACTGCC TAATCTTTGT TTGGATGTTG TACAATTGGC TCAGATATTA
TACCCTACTT TAATTAATTA CCGGCTGGCT AATCTCTATG AGTATTTATT TAATACGGAT
GACATTTTAT CTTCGTCTGA TAATATTTTG GCCGGAGAAA TGGCTTTGTT GACGGCCAGG
GTTTTTCTAA AGCTCCGTGA GGGTTTTCGA GGAATGGAAC CTGAGCTGTT AGTAAAATTA
AATAATATTT TAAATAAAAC TCCGGAAAGC CCTTTAATCA ACTTTATGCA AGGCCTAACC
GCCGGTGTAG TAAAAAACTA CTTCCTGTCT GGCAGGCCGT TGGTCGGCAC TGATTTACAG
ACTAACGCAG TGCTTGAAGA TGAACAGAGC TCGTTCTTTG AGTCCTCAAA TGAAACTGTA
CAAGTGTATG TCTCTAATTT GAATCAAAAA CAAGTAGTTG ATATCCTGGG CCCGGAAGGG
GAGTTGGCCA AACAGCACCC TCATTATGAG CACCGTCCCC AACAGTTGCA AATGTCTGTG
GCAGTAGCCC AAACACTTAA CAAGCAGTCC CTGCTGCTTA CCGAAGCAGG GACCGGTACC
GGTAAATCAA TGGCTTACCT GGTGCCCGCT GTATTGTGGT CCGCACAAAA CCGGGAGAGA
GTAGTCGTTT CAACTCACAC GATAAACCTC CAGGAACAGC TATGGTTTAA GGATATTCCA
ATGTTGCAAC AGATGTTTGG GAAAAGCTTC CGGGCAGCCT TGGTCAAGGG AAGACAAAAT
TACCTGTGTC TTAGCCGGTG GTCTGAAGTA TTTTCAAGCA CGGATAATCA TAGTCGCTGG
GAAGCCTTGT TTTACAGCCG TATTCTGGTT TGGTTGACAA AAACACAGAC CGGAGATCGC
AGTGAGATTA ATTTAAACGG TGCGGAATAT GATTACTGGT CAAAAATTTC GGCTGACAGT
GACAGGTGTA AAGGCAATCA ATGTCACTGG TTTCAAAAAG CCTGTTTTGT CAGCAGAGCT
AAAAAGACAG CGGAAAACTC GGACCTGATA ATTATCAATC ACTCTCTTCT ATGTTCTGAT
TTGCAGGTGG AAAATCGAAT TTTACCGTCT TATGGGCCGC TGGTAATTGA TGAGGCACAT
CACTTAGAGA ATGTTGCCAC AGAGCATTTT GGCTATATGA TTTCCGAAAG CAGTATCAAG
CGCTGGCTGG AAAGTACAGA TAAACTGGCA ATTAAGCTTT CTCACAATCC GGCTGCGGAG
GCAAATAATA ACTTCGACCA GAAAATTTAT GCTGTTCGTA AGTCTGTTGA GGATATCCGT
CATGCGTCCG GAGTATATTT TAACTTATTA AGAACCGAAC ATAGTATCAA TGATTATGCT
GAAGAACCTG TAGAAGCGGC AAACCAAAAT GCAGGCGGTT TATGCGTCAG CAGACTTTAT
AAAGAAGCCG GTCAAGAACA ATTGTTAGTC GAAGAGGACA ACTTATTAAC CGGATTTAAA
ATTCTCATGG ATAATCTGAA GAAAATAATG TTGAAGCTTG AAATCTGGGC TGCACAGTAT
GAGAAGTGGG TTAACACGGC GAAAATATTT TCACTGCATT TAAACCTGGG AACGCAGCTT
TTTGCTTCCA TAGAGTTTAT TCTAACCCAC AGTGATCCAA ATTTTGTTTA TTGGATGGAA
AAAAATTATT TTCAAAGCAA CACTTATATA ACCCTGCGCT CTTCTCCCAT TGACATAGGA
AAACTGCTTT ATGAAAAACT CTTTGCTTCT AAAAAAGCGG TAATTTTAAC TTCAGCCACA
TTGTCCATTG CCGGTTCTTT TGATTATTTT AAAGAACGCG TAGGATTGAA TTTGTACACA
GAAGAAATAA GTGAATTGCA AATAGATTCC CCTTTTAATT ACGGAAAGCA GGCCAAACTT
TTTCTTACTT CCGATTTGCC AAGTCAAAAC GAAGTGCCTG AGCAATTCTA TCATACGGAA
CTGGCGAATA TAATAGAGAA ATTGGTAAAT GTTTCGCAGG GGAAAACCCT GGTGCTTTTT
ACTTCACACC GAAGCTTAAA ACAAACATAT TTACGGCTAA AGCCGGTATT GGAAGATAAG
GAGATATTGT TATTAGGCCA CAATATTGAC GGATCCCGTT CAGCTTTAAT TGAAGAGTTT
GTTAGAAACA AGAAAGCTGT TTTATTTGGA ACCGCAAGCT TTTGGGAAGG GATTGATATC
CCGGGTGACA GTTTAAGTTC TGTGATCATA GTTAAGCTGC CGTTTTGGGC GCCCAGTATC
CCTATTATTG AAGCCAGGTT GGAAAGCCTG ATCAAGCAGG GTAAAAACGG TTTTTGGGAA
TTCAGCCTGC CTCAAGCAGT AATTCGTTTT AAACAGGGCT TTGGCAGATT AATTAGAAGC
AGTCGAGACT ACGGAGCAGT AATTGTACTT GATAAAAGAA TTATACAGAA GAAATACGGG
CGTTATTTCC TTAATTCACT TCCCTTGAAG CACCACCAGA GAGGGGATAT GGAAAACCTG
CTGACTCAGA TGACTGATTG GTTGGGCAAA AAAAAGAGCA CGGTGAAAAT ATAA
 
Protein sequence
MLENFVVAHI ITTGNDPLKE DVIETSLVRV SGSQIAETIS FYSKPARKLP VRVKNITGLS 
DETLADKPFF NELLPEILSF IGASTLVSCE ADLIYIFFSA AAGYPLPNLC LDVVQLAQIL
YPTLINYRLA NLYEYLFNTD DILSSSDNIL AGEMALLTAR VFLKLREGFR GMEPELLVKL
NNILNKTPES PLINFMQGLT AGVVKNYFLS GRPLVGTDLQ TNAVLEDEQS SFFESSNETV
QVYVSNLNQK QVVDILGPEG ELAKQHPHYE HRPQQLQMSV AVAQTLNKQS LLLTEAGTGT
GKSMAYLVPA VLWSAQNRER VVVSTHTINL QEQLWFKDIP MLQQMFGKSF RAALVKGRQN
YLCLSRWSEV FSSTDNHSRW EALFYSRILV WLTKTQTGDR SEINLNGAEY DYWSKISADS
DRCKGNQCHW FQKACFVSRA KKTAENSDLI IINHSLLCSD LQVENRILPS YGPLVIDEAH
HLENVATEHF GYMISESSIK RWLESTDKLA IKLSHNPAAE ANNNFDQKIY AVRKSVEDIR
HASGVYFNLL RTEHSINDYA EEPVEAANQN AGGLCVSRLY KEAGQEQLLV EEDNLLTGFK
ILMDNLKKIM LKLEIWAAQY EKWVNTAKIF SLHLNLGTQL FASIEFILTH SDPNFVYWME
KNYFQSNTYI TLRSSPIDIG KLLYEKLFAS KKAVILTSAT LSIAGSFDYF KERVGLNLYT
EEISELQIDS PFNYGKQAKL FLTSDLPSQN EVPEQFYHTE LANIIEKLVN VSQGKTLVLF
TSHRSLKQTY LRLKPVLEDK EILLLGHNID GSRSALIEEF VRNKKAVLFG TASFWEGIDI
PGDSLSSVII VKLPFWAPSI PIIEARLESL IKQGKNGFWE FSLPQAVIRF KQGFGRLIRS
SRDYGAVIVL DKRIIQKKYG RYFLNSLPLK HHQRGDMENL LTQMTDWLGK KKSTVKI