Gene Dtox_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1244 
Symbol 
ID8428183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1260045 
End bp1260563 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content36% 
IMG OID645033575 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_003190749 
Protein GI258514527 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.35967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA CGGGAGTTGT CAGACGGATT GACGATTTGG GCCGAGTTGT GATACCCAAA 
GAAATCAGAC GAACTTTGAG AATAAATAAT GCGGATCCCC TGGAAGTATT TGTAGACGGT
AAAGGTAAAG TAATATTAAA AAAATATGAA CCTATACAAG ATTTGAGTAA ATATGCAAAA
GAATATGCTG CCTCTTTATT TGAATCATTG GGACGCAAAA CATTTATTTG TGATGAGGAG
AATATTATTG CAGCTGCAGG CATACCGGCT AAGCAGAGTA TGAATAAAGA CATTTCCGAC
GATATTAAAA GTTTAATTAA GAGAGATGAA CCTACCTTAG AAAGAGATAA AATTGTTATT
GAAGGCGGTG AAAGATTTCC ATATATTTTA GTAACCCCGG TTAAATTAAA TGAGCACTCG
GTTGGAGCGA TAATAATGAT TGCTGATGAG GAAATGGGTG GCCTGGAAAT AAATCTAACC
AAAACTGCTG CTAACTTTTT AGCAAAGCAG CTGCATTAG
 
Protein sequence
MKATGVVRRI DDLGRVVIPK EIRRTLRINN ADPLEVFVDG KGKVILKKYE PIQDLSKYAK 
EYAASLFESL GRKTFICDEE NIIAAAGIPA KQSMNKDISD DIKSLIKRDE PTLERDKIVI
EGGERFPYIL VTPVKLNEHS VGAIIMIADE EMGGLEINLT KTAANFLAKQ LH