| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1230 |
|---|
| Symbol | |
|---|
| ID | 8428169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 1248614 |
|---|
| End bp | 1249198 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645033563 |
|---|
| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| Protein accession | YP_003190737 |
|---|
| Protein GI | 258514515 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000738057 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTACTC TGGTTCCGAT TGTAGTTGAG CAAACTAACC GCGGTGAAAG ATCTTATGAT
ATATACTCAC GTTTGCTCAA GGACAGAATT ATTTTCATCG GCGGTCCTAT TGAGGATTAT
ACTGCTAACT TAATTATTGC TCAGCTTTTA TTTTTGGAGG CTGAAGATCC GGAAAAGGAT
ATTCACCTGT ATATTAATTC ACCGGGCGGG GTTGTTACAG CAGGTATGGC CATTTATGAT
ACTATGCAAT ACATTAAACC GCCTGTATCT ACAATTTGTT TGGGGCAAGC CGCCAGTATG
GGTTCTTTCC TGTTAGCTGC CGGGGCACCT GGTAAAAGAT TTGCTCTTCC CTATGCCAGA
ATAATGATTC ACCAGCCGTC AGGCGGTATG CAAGGACAGG CCACTGATAT CGGTATTCAT
GCTAAAGAAA TATTGCGCAT GAAGGAGATA TTAAATAAAT TACTATCTAA ACACACCAAA
CAACCTTTGG ATAAAATAAC CAGAGATAGT GAGCGAGATT TCTTTATGTC AGCAGAGGAC
GCTAAGGAAT ACGGCATTAT TGATCAAATA GTTACCAGAA AATAA
|
|---|
| Protein sequence | MSTLVPIVVE QTNRGERSYD IYSRLLKDRI IFIGGPIEDY TANLIIAQLL FLEAEDPEKD
IHLYINSPGG VVTAGMAIYD TMQYIKPPVS TICLGQAASM GSFLLAAGAP GKRFALPYAR
IMIHQPSGGM QGQATDIGIH AKEILRMKEI LNKLLSKHTK QPLDKITRDS ERDFFMSAED
AKEYGIIDQI VTRK
|
|---|
| |