Gene Dtox_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1226 
Symbol 
ID8428165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1245048 
End bp1245578 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID645033559 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_003190733 
Protein GI258514511 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0176208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCACG CCACAACCAT AGTAGCTGTA CAAAAAGATG GGAAAACAGC TATAGCCGGG 
GACGGTCAGG TTACTTTTGG TGATAGGACC GTAATTAAAC ACAAAGCCCG TAAAATACGC
CGTTTGTATA ACCATAAGAT ATTGGCGGGT TTTGCCGGTT CGGTAGCGGA TGCTTTTACT
TTGTTTGAGA AATTTGAGGC AAAGCTTGAA GAATATAACG GCAATTTACA AAGAGCTGCG
GTAGAGTTAG CCAAGGAATG GCGTATGGAT AAAATTTTAA GGCGTTTAGA AGCCTTGCTG
ATTGTAGCTG ACAAAGAGAC CATGTTGGTA CTGTCAGGGG GAGGCGAAGT AATAGAACCT
GATGACGGGG TAATAGCAGT GGGCTCCGGT GGCCCTTATG CTCTGGCTGC AGCCAGGGTT
CTGGCCAAGC ATACCCAATT GGAGCCAAAA GAAATCGTAC GTGAAGCACT GGCTGTGGCA
GCAGATATTT GTGTCTATAC TAACAACAAC ATCATTGTAG AAGAGATATA G
 
Protein sequence
MFHATTIVAV QKDGKTAIAG DGQVTFGDRT VIKHKARKIR RLYNHKILAG FAGSVADAFT 
LFEKFEAKLE EYNGNLQRAA VELAKEWRMD KILRRLEALL IVADKETMLV LSGGGEVIEP
DDGVIAVGSG GPYALAAARV LAKHTQLEPK EIVREALAVA ADICVYTNNN IIVEEI