| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1196 |
|---|
| Symbol | |
|---|
| ID | 8428135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1217651 |
|---|
| End bp | 1219000 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645033529 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_003190703 |
|---|
| Protein GI | 258514481 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0364721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.124331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTTTTT CTAGTCTTGC AGAAAGGCTG CAGGAAACCT TTAAGAAGCT TAGAAATAAA
GGTAGCCTCA AGGAAGCTGA TGTTTCGGAA GCCTTGCGTG AAGTGCGGGT TGCCTTATTG
GAAGCTGATG TAAACTTCAA GGTGGTCAAG GACTTTGTAA ACAAAGTCAA GGAAAAGGCT
ATAGGCCAGG ACATATTAAG CAGCCTGACA CCGGCCCAGC AGGTAATTAA GATTGTTCAC
CAGGAGTTAA TGGACCTGAT GGGTGGTGAA TACAGTAAGA TTAATTTAGC TCCCAAACCA
CCAACAGTTA TTATGATGGT GGGGTTACAC GGAGCAGGTA AGACCACAAC TTCAGCTAAA
CTGGCCAATT TCTTGCGAAA ACAAGGGCGT AGGCCGTTGC TGGTGGCAGG AGATATTCAC
CGTCCGGCAG CTATTAAGCA GCTTCAGGTA TTAGGGGAAC AGCTTGATAT ACCTGTTTTT
ACCATGGGCG ATAAGCAAGC TCCCGCTGTG ATAGCCAGAG CCGCTATAGA AAATGCTTCA
AACAGCGGTC GCGATCTGGT TATTATTGAC ACGGCCGGCA GATTGCATAT AGACGAAGAA
CTGATGGATG AGTTGGAAGC TGTTAAATCT GAAGTTAAGC CTAATGAAAT ACTGCTGGTG
GTAGATGCCA TGACAGGTCA GGATGCGGTT AATGTTGCAG AAGTTTTTAA CAGGCGCATG
CAGCTAAACG GTGTAATAAT GACCAAACTT GATGGTGATA CCAGGGGCGG GGCGGCACTT
TCTGTTAAAG CTGTAACCGG TTGTCCCATC AAATTTGCCG GTATAGGTGA AAAACTGGAT
GCGTTAGAGA CTTTTCACCC AGATCGCATG GCGGATCGTA TTTTAGGTAT GGGTGATGTG
CTAACATTGA TTGAAAAGGC TCAAGCTAAT TTTGACGCTG AGAAAGTGGC GGAATTAAAC
AAGAAAATAC GTAGTATGGA ATTTACTCTG GATGATTTTC TTGAACAACT TCAGCAGGTT
AAAAAATTGG GCCCGCTGGA ACAGGTATTA AGCATGTTTC CTGGAATGGG TGGGCTAAAA
AAAATCAAAA ACCTGGAATT CGATGAAAAA GAACTAGTCT ATGTGGAAGC AATAATCAAA
TCTATGACTC ATAAGGAAAG AGAAAAACCG GAGATCATTA ATGGAAGTTG CAGGCGCAGA
ATAGCTAAGG GCAGCGGAAC CAGTGTCCAA GAGGTAAACA GGTTGTTGAA ACAGTTTGAA
CAAACCAAGA AAATGATGAA GCAGTTTTCC GATATAGATA AAACCATAAA AAAAGGCGGC
AAAATGCCAA AGATTCCATT TTTTCAATAA
|
|---|
| Protein sequence | MVFSSLAERL QETFKKLRNK GSLKEADVSE ALREVRVALL EADVNFKVVK DFVNKVKEKA
IGQDILSSLT PAQQVIKIVH QELMDLMGGE YSKINLAPKP PTVIMMVGLH GAGKTTTSAK
LANFLRKQGR RPLLVAGDIH RPAAIKQLQV LGEQLDIPVF TMGDKQAPAV IARAAIENAS
NSGRDLVIID TAGRLHIDEE LMDELEAVKS EVKPNEILLV VDAMTGQDAV NVAEVFNRRM
QLNGVIMTKL DGDTRGGAAL SVKAVTGCPI KFAGIGEKLD ALETFHPDRM ADRILGMGDV
LTLIEKAQAN FDAEKVAELN KKIRSMEFTL DDFLEQLQQV KKLGPLEQVL SMFPGMGGLK
KIKNLEFDEK ELVYVEAIIK SMTHKEREKP EIINGSCRRR IAKGSGTSVQ EVNRLLKQFE
QTKKMMKQFS DIDKTIKKGG KMPKIPFFQ
|
|---|
| |