| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1183 |
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| Symbol | rnc |
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| ID | 8428122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 1205502 |
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| End bp | 1206281 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645033517 |
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| Product | ribonuclease III |
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| Protein accession | YP_003190691 |
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| Protein GI | 258514469 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000192839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0311814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA ATCAGGATAA TATAATGCAA TTGATGCAAC AGGTTGGAGT TGCGTGGAAC
GATGAAAACC TTCTCTGGCA AGCCTTGACA CACAGTTCGT ATGTTTATGA GAGTGGCTCT
GCCGCCCATA CCAATAACCA GCGGCTAGAG TTTTTAGGTG ATGCTGTTTT GGAACTTTTG
GTAAGTGGCT ATCTATATAG TTCTTATCCA GAATGTGCCG AGGGTGAGTT AACTAAATTA
AGGGCTGCCA TAGTATGTGA ACCTTCGCTG GCTAAAGTAG CCCGTCAGCT TAATTTGGGT
TACTGTCTCA GGATGGGCAA AGGTGAGGAG CGCTCCGGCG GGAGGGAACG GCCATCTATT
CTGGCTGATT CTTTTGAGGC ATTGTTGGGC GCGGTTTATC TGGACCAGGG TCTGGAAAAA
ACAAGGATGT TCGCTCTCAA ATTTTTGGCT CCGGTTATAA ATGATGTGCT GGAAGGTAGG
GTGGATCGGG ATTATAAAAC GGAATTGCAG GAAATGCTGC AGAAAAAATC ACCGGAACCG
ATTAGCTATG TGATATTAAA TGAAGAAGGA CCGGATCACC AGAAGTTATT TACAGCTGGT
GTTGTTTATT GTGGAATAAT AATTGGGCAA GGGACAGGAC GCTCTAAAAA AGAAGCTGAA
CAACAGGCAG CTAAAATAGC CTTGCTGGAA TTGCCGTCTA ACGGCGAAAT CAATTTGCGG
GTTCGTTCTC ATCTGCATAC GGGAGCCAGA AGAAGACCTA TGCAAAAGTG CAAGCGGTAG
|
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| Protein sequence | MKKNQDNIMQ LMQQVGVAWN DENLLWQALT HSSYVYESGS AAHTNNQRLE FLGDAVLELL
VSGYLYSSYP ECAEGELTKL RAAIVCEPSL AKVARQLNLG YCLRMGKGEE RSGGRERPSI
LADSFEALLG AVYLDQGLEK TRMFALKFLA PVINDVLEGR VDRDYKTELQ EMLQKKSPEP
ISYVILNEEG PDHQKLFTAG VVYCGIIIGQ GTGRSKKEAE QQAAKIALLE LPSNGEINLR
VRSHLHTGAR RRPMQKCKR
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