| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1120 |
|---|
| Symbol | tgt |
|---|
| ID | 8428059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1149510 |
|---|
| End bp | 1150619 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645033455 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_003190629 |
|---|
| Protein GI | 258514407 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0231453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAA AATATAAACT GATAAAAAAA GACAATAAAT CTCATGCCCG GCTTGGTATA
TTATCTACAC CGCACGGGGA AATTGAGACA CCGGTTTTTA TGCCTGTGGG AACTCAGGCT
ACGGTTAAAG CTATGACTCC GGAGGAAGTT AGGGAAGCGG GCGGCAGAAT AGTTTTAAGC
AATACTTACC ATTTATATCT GAGGCCGGGA CATGAGTTGA TTCGTGATGC GGGAGGCCTG
CACAGGTTCA TGAACTGGGA CGGCCCGATT TTAACAGATA GCGGTGGATT TCAGGTATTC
AGCCTGGGAC CGCTTAGAAA AATAACCGAA GACGGGGTGG CTTTTCGCTC TCATATTGAC
GGTTCTTCGC ATTTTTTTAG CCCGGAACAT GCAATGCAAG TTCAAATGGC TCTTGGTTCT
GATATAGCCA TGGTCTTTGA TGAATGCGCT CCTTATCCCT GCTCCTATGA AGATAGCCTG
GCTGCTAAAG AAAGAACAAC ACGCTGGGCT TTACGCTGTA AGGAATATCA CAGTCATCCT
GAGCAGAGTG TTTTTGGCAT TGTGCAGGGA GGTATGTATC GTGATTTGCG TGAGCAATCA
GTAGATGAAC TGGTGAAGCT GGATTTTCCC GGTTATGCTA TAGGCGGGTT AAGTGTGGGA
GAGCCAAAAC CATTAATGTA TGAGGTTCTG GATTATACTG TACCTCTCTT GCCTGAAGAT
AAACCCCGTT ACCTGATGGG TGTCGGATCC CCGGATTGTC TGTTGGAGGG TGTAGTAAGA
GGCATAGACA TGTTTGACTG CGTGCTGCCT ACCAGAATTG CCAGAAACGG CACAGTTTTT
ACCAGACAGG GAAAGCTTGT TGTCCGCAAC GCGGCCTATG CCAGAGATTT TGTACCGCTT
GAGGAAGGCT GCGCTTGTTA TACCTGCCGG CACTATACCA GAGCTTATAT CAGACATCTG
CTTAAATCCG ACGAAATATT GGGTGTAAGG CTGACCACCA TTCATAACCT GCATTTTCTT
TTAAATCTAA TGGAGGATAT TAGAGAAGCA ATCAGAGAAG ATCGTTTATT GGAGTATAAA
GATCATTTTT TAAAAGATTG GCAGGCATAA
|
|---|
| Protein sequence | MVVKYKLIKK DNKSHARLGI LSTPHGEIET PVFMPVGTQA TVKAMTPEEV REAGGRIVLS
NTYHLYLRPG HELIRDAGGL HRFMNWDGPI LTDSGGFQVF SLGPLRKITE DGVAFRSHID
GSSHFFSPEH AMQVQMALGS DIAMVFDECA PYPCSYEDSL AAKERTTRWA LRCKEYHSHP
EQSVFGIVQG GMYRDLREQS VDELVKLDFP GYAIGGLSVG EPKPLMYEVL DYTVPLLPED
KPRYLMGVGS PDCLLEGVVR GIDMFDCVLP TRIARNGTVF TRQGKLVVRN AAYARDFVPL
EEGCACYTCR HYTRAYIRHL LKSDEILGVR LTTIHNLHFL LNLMEDIREA IREDRLLEYK
DHFLKDWQA
|
|---|
| |