Gene Dtox_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1042 
Symbol 
ID8427981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1066004 
End bp1067218 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID645033377 
Productprotein of unknown function DUF214 
Protein accessionYP_003190551 
Protein GI258514329 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTAT TCAATAACTT AGAAGTTGCT TTGAATGGTT TGAAAGCTAA TAAATTAAGA 
TCAGCTTTAA CTATGTTGGG AATAATTATA GGTGTTTCAG CAGTGATTAT TATGGTTTCC
GTGGGACAGG GTGCCAGTAA AAAGATTTCA GCCCAGATTT CAAGTATGGG TTCTAATCTC
TTAATGGTTT TTCCCGGTGC GGGAAGTGGA CCGGTAAGGG GCTCCGGGGG CAATGTAAAC
ACACTTACTC TGGATGATGC GAATGCTATT GCTGAATTGA ACCTGGTATC TAATACAGCT
CCCGAGCTTT CAACCGGTGT TACTGCCACT TATGGCAGTC AGACATGGAC GGCTGAAGCT
GATGGAACAA CTCCTGAAAT GCAGCTTATC AAAGACTTAT CCGCTTCTTC CGGGTCATTT
TTTACAGCGG ATGACGTTAA GTCGAGTTCC ATGGTGGCAG TGCTGGGAAA AACAGTAGTG
GATAATCTCT ACCCGGTTGA TATAGACCCG GTTGGGACGA CAATCAGGAT TAATAAACTC
ACATTTACAG TAGTTGGCGT GCTGGCTTCT AAAGGAGCTT CAATGGGTGG GCAGGATCAG
GACAATGTAA TTTTTATACC GATAACTACC GCGCAGATCA AGCTCCTGGG AGTAAAGAAT
GTACGTTTAA TTAATGTACA AACAGAAACA CCTGAGAGTA TGAGTTATGT TCAAGCAAGT
GTAGAAGACT TATTGAGAAA CAGGCATCGG CTGAATCATC AGCAGGATGA TTTTAATGTG
CGCAACCTGA CTTCAGTTCT GGAGACCGCT GAGAGTGCTA CCAATATAAT GACACTCCTG
CTGGCCAGCG TAGCCGCTGT TTCACTGCTG GTGGGGGGTA TAGGTATAAT GAATATAATG
CTGGTATCCG TAACCGAGAG AACCAGGGAA ATAGGTTTAC GTATGGCAGT GGGTGCTACT
CAGAGCAATA TAAGAAACCA GTTTCTGGTG GAAGCACTGG TGCTGTGCCT GATCGGGGGG
CTGGCGGGGA TCATTATCGG TATTGCCGGT TCTAATTTGG TTTCAAAGTT GTTGGGTTGG
ACAACCAGCG TTACAATGAC CTCTGTATTA ATTTCAGCCG GTTTTTCAGC TGCTATAGGA
ATATTTTTCG GCTTTTACCC GGCCAAAAGA GCGGCGGAGC TTGACCCGAT AGAAGCGCTG
CGATTTGAAA AGTAA
 
Protein sequence
MNLFNNLEVA LNGLKANKLR SALTMLGIII GVSAVIIMVS VGQGASKKIS AQISSMGSNL 
LMVFPGAGSG PVRGSGGNVN TLTLDDANAI AELNLVSNTA PELSTGVTAT YGSQTWTAEA
DGTTPEMQLI KDLSASSGSF FTADDVKSSS MVAVLGKTVV DNLYPVDIDP VGTTIRINKL
TFTVVGVLAS KGASMGGQDQ DNVIFIPITT AQIKLLGVKN VRLINVQTET PESMSYVQAS
VEDLLRNRHR LNHQQDDFNV RNLTSVLETA ESATNIMTLL LASVAAVSLL VGGIGIMNIM
LVSVTERTRE IGLRMAVGAT QSNIRNQFLV EALVLCLIGG LAGIIIGIAG SNLVSKLLGW
TTSVTMTSVL ISAGFSAAIG IFFGFYPAKR AAELDPIEAL RFEK