Gene Dtox_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1005 
Symbol 
ID8427944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1024475 
End bp1025704 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content40% 
IMG OID645033340 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_003190514 
Protein GI258514292 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.465906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.81139e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAAGA AGCATATCAT CGGTATTATC TTTTTAATAT ATTTACTGGC ATTTGCTGCA 
CCGGTATTTG CAGATGATGC CCCCGATATC ACCGGTATGA CTGCAGTATT AATGGATGCT
CAAAATATGC AAATACTATA TAATAAAGAC ATGCAGGAGA GGATGTATCC AGCCAGCACA
ACCAAGATCC TTACTGGTAT TATTGCTATT GAAAAAGGTA AAATGGATGA TCTGATACCT
GTGAGTTGGG AAGCGGCAAA TACTGAGGGA ACAAATATCG GTTTGCAAGA AGGGGAGAAA
CTAACTCTTA GGGATTTGCT TTATGCTTTG TTGCTTTCTT CCTCCAATGA TGCCGCGGAG
GCCATTGCTG AGCACTATGG AAAGTCTGCG GATAATTTTG CTGTTATGAT GAATCAAAAG
GCGAAAGAAA TAGGGGCTGT TCATTCCCAT TTTACTAATC CTCATGGTCT GCCGGATGAA
GATCATTATA CTACCGCTTA TGATTTAGCT CTAATCGCAA GGTATGCTAT GCAAAATGAT
AAGTTCAGGG AAATAGTGCG GGAAAAAGAA ATAACTATTG CCAGGGTTGA TCCTGAAGGT
CAAAAATATA TGGTGAATCA TAATAAGCTG TTGTCCAGAT ATGAAGGGGC TATTGGTATC
AAAACCGGTT ATACTGTTGC AGCCGGACAG TGTATTGCGG CAGAAGTCAA GCGAGATGAC
CGTGAGTTGA TTGCGGTAGT GTTAAAGAGT GAAGGGAATG ATCTTTGGAC TGATACGGAG
AATTTGTTTA ACTATGGTTT TAATAGTTTT CGTAATATAT ATCTGGTCAA GCGTGGACAG
GTTATGGGTC AGGCAGAAGT GTCGAATGGC TCACTGAAGG CTGTTTCCCT GGTAACCGAC
AGGGATTTTA CCTGGAATTT GCCTACTAAA AATGGCAATG AATTAAAAAG AAGGCTGGTT
TTGAATAAAA ATATAAAAGC TCCGCTGAAA AAAGGTCAAA AATTGGGCGA GCTAATCTTT
AGTGATGGAG AAACCGACAT AGCTCGTATT GATTTACTGG CTCAAAGCGA TATTGAAAGA
AATATTATTG CCAGGTGGTG GGTTTGGTCC TTATCGGTGG GTTTAGTGGG AATATTATTG
GGAATATTAT TATTGAGGTT AAGAATAAGC AGAATTCGTA GACGCAAGCG TTATATCAGA
CGCCGGTACT CCAATGGATA TATAAGATAA
 
Protein sequence
MLKKHIIGII FLIYLLAFAA PVFADDAPDI TGMTAVLMDA QNMQILYNKD MQERMYPAST 
TKILTGIIAI EKGKMDDLIP VSWEAANTEG TNIGLQEGEK LTLRDLLYAL LLSSSNDAAE
AIAEHYGKSA DNFAVMMNQK AKEIGAVHSH FTNPHGLPDE DHYTTAYDLA LIARYAMQND
KFREIVREKE ITIARVDPEG QKYMVNHNKL LSRYEGAIGI KTGYTVAAGQ CIAAEVKRDD
RELIAVVLKS EGNDLWTDTE NLFNYGFNSF RNIYLVKRGQ VMGQAEVSNG SLKAVSLVTD
RDFTWNLPTK NGNELKRRLV LNKNIKAPLK KGQKLGELIF SDGETDIARI DLLAQSDIER
NIIARWWVWS LSVGLVGILL GILLLRLRIS RIRRRKRYIR RRYSNGYIR