| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1005 |
|---|
| Symbol | |
|---|
| ID | 8427944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1024475 |
|---|
| End bp | 1025704 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645033340 |
|---|
| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
|---|
| Protein accession | YP_003190514 |
|---|
| Protein GI | 258514292 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.465906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000981139 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA AGCATATCAT CGGTATTATC TTTTTAATAT ATTTACTGGC ATTTGCTGCA
CCGGTATTTG CAGATGATGC CCCCGATATC ACCGGTATGA CTGCAGTATT AATGGATGCT
CAAAATATGC AAATACTATA TAATAAAGAC ATGCAGGAGA GGATGTATCC AGCCAGCACA
ACCAAGATCC TTACTGGTAT TATTGCTATT GAAAAAGGTA AAATGGATGA TCTGATACCT
GTGAGTTGGG AAGCGGCAAA TACTGAGGGA ACAAATATCG GTTTGCAAGA AGGGGAGAAA
CTAACTCTTA GGGATTTGCT TTATGCTTTG TTGCTTTCTT CCTCCAATGA TGCCGCGGAG
GCCATTGCTG AGCACTATGG AAAGTCTGCG GATAATTTTG CTGTTATGAT GAATCAAAAG
GCGAAAGAAA TAGGGGCTGT TCATTCCCAT TTTACTAATC CTCATGGTCT GCCGGATGAA
GATCATTATA CTACCGCTTA TGATTTAGCT CTAATCGCAA GGTATGCTAT GCAAAATGAT
AAGTTCAGGG AAATAGTGCG GGAAAAAGAA ATAACTATTG CCAGGGTTGA TCCTGAAGGT
CAAAAATATA TGGTGAATCA TAATAAGCTG TTGTCCAGAT ATGAAGGGGC TATTGGTATC
AAAACCGGTT ATACTGTTGC AGCCGGACAG TGTATTGCGG CAGAAGTCAA GCGAGATGAC
CGTGAGTTGA TTGCGGTAGT GTTAAAGAGT GAAGGGAATG ATCTTTGGAC TGATACGGAG
AATTTGTTTA ACTATGGTTT TAATAGTTTT CGTAATATAT ATCTGGTCAA GCGTGGACAG
GTTATGGGTC AGGCAGAAGT GTCGAATGGC TCACTGAAGG CTGTTTCCCT GGTAACCGAC
AGGGATTTTA CCTGGAATTT GCCTACTAAA AATGGCAATG AATTAAAAAG AAGGCTGGTT
TTGAATAAAA ATATAAAAGC TCCGCTGAAA AAAGGTCAAA AATTGGGCGA GCTAATCTTT
AGTGATGGAG AAACCGACAT AGCTCGTATT GATTTACTGG CTCAAAGCGA TATTGAAAGA
AATATTATTG CCAGGTGGTG GGTTTGGTCC TTATCGGTGG GTTTAGTGGG AATATTATTG
GGAATATTAT TATTGAGGTT AAGAATAAGC AGAATTCGTA GACGCAAGCG TTATATCAGA
CGCCGGTACT CCAATGGATA TATAAGATAA
|
|---|
| Protein sequence | MLKKHIIGII FLIYLLAFAA PVFADDAPDI TGMTAVLMDA QNMQILYNKD MQERMYPAST
TKILTGIIAI EKGKMDDLIP VSWEAANTEG TNIGLQEGEK LTLRDLLYAL LLSSSNDAAE
AIAEHYGKSA DNFAVMMNQK AKEIGAVHSH FTNPHGLPDE DHYTTAYDLA LIARYAMQND
KFREIVREKE ITIARVDPEG QKYMVNHNKL LSRYEGAIGI KTGYTVAAGQ CIAAEVKRDD
RELIAVVLKS EGNDLWTDTE NLFNYGFNSF RNIYLVKRGQ VMGQAEVSNG SLKAVSLVTD
RDFTWNLPTK NGNELKRRLV LNKNIKAPLK KGQKLGELIF SDGETDIARI DLLAQSDIER
NIIARWWVWS LSVGLVGILL GILLLRLRIS RIRRRKRYIR RRYSNGYIR
|
|---|
| |