Gene Dtox_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0976 
Symbol 
ID8427915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp998772 
End bp1000100 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content42% 
IMG OID645033314 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003190488 
Protein GI258514266 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00434157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.514512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACT CCAAAATATT AATAATTGAT AACGATATAA GCTCTTGCCG AACAATGGAA 
CGGGCTATCC AACAAGAAGG CTATCAAGCC ATAATCGCCA CTAACGAGCC GGACGCTGTC
TCGCTTTTAA TAAAAGAAAT GTTTTACTTA GTCTTTCTAG GCCTGGAAAC AGATAATAAT
GATCCGCTCA TAAATATAAA AAGCTTTTCC CCTTCTGTTC CGATAATTAT GCTAGCTCAC
CAGGGTACTA TTGAAAAGGC TATTGACGCT CTTAAAAAAG GTGCCATGGA TTACATGACG
AAACCGGTAA ATCCGGAAAA ATTAAAGAAT ATCCTCAAAA CACTGTCTGC CAGCCACAAA
AATAAATTAA GCTCTACTCA AGACTATAAC TATATATTGG GAGAAACTCC AGCGATAATA
GAAATTAACA GGCTAATCGA AAAAGTAGCA GCCACAAACG CCACTGTTTT AATTACAGGA
GAAAGCGGCA CCGGCAAAGA AGTAGCCGCT ATGTCCATAC ACAGGGCCAG CCAACGCTGC
AACAATCCCT TTGTTACCGT AAACTGTGTG GCACTTCCGG AACAGCTTTT AGAAAGCGAG
CTGTTCGGGC ATGAAAAAGG TGCTTTTACA GGGGCTTTTA CCAAAAGACA GGGCAGGTTT
GAATTAGCGC ATACAGGTAC GGTTTTTCTT GACGAAATCG GTGATATGCC TTTAACTATG
CAGGCAAAAC TGCTTCGCAT ATTGCAGGAA AAATCTTTTG AAAGAGTTGG CGGAACAGAA
ACACTCAATA TTGATGTCAG GGTAATTGCA GCCACTAACA AAAATCTGTC TGATGCTGTG
ATGAACGGTA TGTTTCGGGA AGACCTGTAC TACAGGTTAA ACGTAATCCA TATCCACCTT
CCTCCTCTGA GAGAGAGAAA GGAAGACATA CCGCTCTTAG TTTCGCATTT TTTAGATAAA
TTATCACATA CCTATCAGGC TAAAAAAGTA TCCGGAGAAG CTATGCGGCT TCTTTATAAT
TACTGCTGGC CCGGCAATAT CCGTGAAATG CAAAATATAA TCGAAAGGGC CGTAATTATA
AGTCAGGACC TGGAAATACT TCCCGTGCAT TTACCTCCGG AACTGCAAAA GTCCTCTGCC
GCCACTGTTG AACCAATCAT AAGATTGCCC GACGAGGGAA TCTCACTGGT GGAAGTAGAA
AAACAACTTA TCATCATGGC ACTGCAAAAA AGCAAAGGCA ATCAGACCAA AGCAGCTCAA
TTGCTGGGCA TAACCCGTTC GGCTTTACTC TATCGCACAC AAAAATATGG GATTCCCCTA
ATAACCTGA
 
Protein sequence
MTDSKILIID NDISSCRTME RAIQQEGYQA IIATNEPDAV SLLIKEMFYL VFLGLETDNN 
DPLINIKSFS PSVPIIMLAH QGTIEKAIDA LKKGAMDYMT KPVNPEKLKN ILKTLSASHK
NKLSSTQDYN YILGETPAII EINRLIEKVA ATNATVLITG ESGTGKEVAA MSIHRASQRC
NNPFVTVNCV ALPEQLLESE LFGHEKGAFT GAFTKRQGRF ELAHTGTVFL DEIGDMPLTM
QAKLLRILQE KSFERVGGTE TLNIDVRVIA ATNKNLSDAV MNGMFREDLY YRLNVIHIHL
PPLRERKEDI PLLVSHFLDK LSHTYQAKKV SGEAMRLLYN YCWPGNIREM QNIIERAVII
SQDLEILPVH LPPELQKSSA ATVEPIIRLP DEGISLVEVE KQLIIMALQK SKGNQTKAAQ
LLGITRSALL YRTQKYGIPL IT