| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0597 |
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| Symbol | |
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| ID | 8427532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 619730 |
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| End bp | 621301 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645032962 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003190140 |
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| Protein GI | 258513918 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000598819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAA AGGGTAAAGC CTGGAAGTTC GGAGCCGATA TTGACACAGA TGCCATTATT
CCGGCCCGTT ACTTAAATAC TTCTGACCCG GTTGAACTGG CCAAACATTG TATGGAAGAT
GCCGATACCT CTTTTGCGCA AAAAGTTCAG CCCGGGGATG TGATTGTAGC TGATAAGAAC
TTCGGTTGCG GCAGTTCGCG TGAGCATGCC CCGATATCCA TCAAATATGC CGGAGTCTCC
TGCGTGATTG CCAAGTCTTT TGCCCGTATA TTTTACCGGA ATGCTTTCAA TATCGGGCTG
CCTATTCTGG AATCAACAGA AGCAGTGGAA GGTATAGATG AAGGAAATGA GGTTTCCGTT
AATGCGGAAA CAGGTACTAT TACCAATGTG ACCAAGGGAG AGACCTATCA AGCTACGGTG
GTGCCTCCGT TTATGCAGCA AATAATTGCC GCAGGTGGAC TTATTAACTA TGTCGCAGAA
AGGATGAAGG TTAAGAAAAT GTATAAGATT GCCGTACTTC CCGGAGATGG AATCGGACCG
GAGATTACTG AACAGGCGTT AAAGGCCTTA AAAGCCGTAG CGGAACATTT TGGCCATGAA
TTTCAGTTTA CCGAAGCCTT AGTCGGCGGA GCTGCCTATG ACGCGGTGGG ACACCCGCTG
CCGAAAGAAA CTTTGGACCT GTGCTACAGC AGCGATGCCA TTTTGCTGGG TGCTGTAGGT
GGTGACAAGT GGGCTGATCT GCCTCCTGAA TTAACTCCGG AAAGAGGAGC ACTCCTGCCC
TTGCGCAAAT TATTGGGCCT CTATGCTAAC CTGCGCCCGG CAGTGGTATT CCCGGCACTT
GCCAATGCCT CCACCTTAAA GCCGGAGGTA GTGGAAGGTT TGGATATTAT GGTAGTGCGT
GAACTGACCG GAGGTCTCTA CTTCGGCGAG AAGAAGAGAG AAGATTTGCC GGACGGCACT
GTTCGTGTAA CCGATACGCT GGTTTACACC ACTGAGGAAA TCGTGCGCAT AGCCCGCCTG
GCTTTTGAGC TGGCTGCTAA GAGGCGTAAG AAAGTCACCC TGGTGGATAA GGCCAATGTG
CTGGAATCTT CACGCTACTG GCGTGAAGTA GTTGCCAATA TGGCTGCTGA GTATCCCGAT
ATTGAGTTTA ATACCATGTA TGTGGATAAT GCGGCTATGC AGTTGGTAAA AATGCCTAAA
CAGTTTGACG TAATTGTTAC TGATAATATG TTCGGTGATA TTTTAAGCGA TCAGGCTTCC
CAGCTTACCG GTTCTCTGGG CATGCTGGCT TCCGCCAGTA TCGGCGGTAA AATCGGCTTG
TATGAACCCA GCCATGGTTC AGCGCCTAAA TATGCCGGTT TGAAAAGAGC TAACCCAATC
GCTACGGTAA TGTCAGGAGC CATGCTGCTG CGCTATTCCT TCGACATGGA GAAAGAAGCT
AAGGCCATAG AAGACGCGGT TACCGAGGTA TTGAAAAAAT ATCGCACCAG GGATATTATG
GAGGAGGGCC TACAGTTAGT CAACACTGAC GAGATGGGCG ACCGTATAGC CGAACAGATT
TTAGCCGGCT AA
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| Protein sequence | MGLKGKAWKF GADIDTDAII PARYLNTSDP VELAKHCMED ADTSFAQKVQ PGDVIVADKN
FGCGSSREHA PISIKYAGVS CVIAKSFARI FYRNAFNIGL PILESTEAVE GIDEGNEVSV
NAETGTITNV TKGETYQATV VPPFMQQIIA AGGLINYVAE RMKVKKMYKI AVLPGDGIGP
EITEQALKAL KAVAEHFGHE FQFTEALVGG AAYDAVGHPL PKETLDLCYS SDAILLGAVG
GDKWADLPPE LTPERGALLP LRKLLGLYAN LRPAVVFPAL ANASTLKPEV VEGLDIMVVR
ELTGGLYFGE KKREDLPDGT VRVTDTLVYT TEEIVRIARL AFELAAKRRK KVTLVDKANV
LESSRYWREV VANMAAEYPD IEFNTMYVDN AAMQLVKMPK QFDVIVTDNM FGDILSDQAS
QLTGSLGMLA SASIGGKIGL YEPSHGSAPK YAGLKRANPI ATVMSGAMLL RYSFDMEKEA
KAIEDAVTEV LKKYRTRDIM EEGLQLVNTD EMGDRIAEQI LAG
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