Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0559 |
Symbol | |
ID | 8427494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 574935 |
End bp | 578441 |
Gene Length | 3507 bp |
Protein Length | 1168 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645032924 |
Product | S-layer domain protein |
Protein accession | YP_003190102 |
Protein GI | 258513880 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGAA AAAACACAAA ATTACAATTC ATAACGTTAT CAGTAATGAT ATTTTTTATC CTGAACATTA TTCAGTTTTC CGGATTAACC AGCCAGTCAG CAAACGGGCA AGAGGCTGTA TATACTTCTG CTGAAATGGC GGCAAAAGCA GTTGATTTTA TTAACGATAA GTATAAGGCG GGAGAGAAAA TTGATGGCTA TACCGCTTAT GTGCTGGCTA TGGCCGGGCA GGATTTGTCA AGTGAGAAAT GGAGCATAAA CGGCACTAGT TTAAGAAGTG AAATCGAAAA CTTAGCCGAC TTAATGGGAA ATAATGTTAA TTTAATAAAT TATGTTTGCT TAACCCAGAA TAATGACGGC AGTTTCGGCC CTTATGCCAA TGAATATGGG ACAAAGGTGC CGCTGCAGGC TTTGTCGACA GTTAAAGAAG ACATTACTGT CGGCAGCGAT GTTTACAATC AGGTGCAGAG TGCCATTGAT AATGCTGTAA ACTTTTTTAA GACAAAATAT CAAAACGGCG GCATGACCTA TGATGTAAAC GGTTGGAGTT TCGATTACCG CTGTGTTGAG GCACTGGCAA AATCGGGGGA GGACCTGTCA GTGGGCGGTT GGGTCTATAA TGGTGTATCC CTCAAAGACA GCATAATGCT TTCTGCCAAT AGTACGGCGC GGTCCATTAA AAAGGATTCA TCTGTACAGG ACGCTGTGTA TCTGTCCAAA GAACTTACGG CTCTTTATGC TGTTGACAAA GCTTCAACCG ACATTGATGT TCTGGCCGGT GCGATTACAG CCAAACAAAA TGGTGACGGC AGTTTCGGGA CAAATATGTT TGACCATATT ATGGTTCTGA ATGCTCTCGG AAAAGCTGGA GCAATCAGTA ATATTGACCA GACAAAGGCA TTTAATTTTA TTGATAATTT GAAAGAAATT CATAAGAACT CCTGGGGTCA AGACGCCGGT GTAGCCTGGG GCTCACAGTA CACAAGCGGT TTTGAAGAGT CTGATACCAC TGCCCAGGTT ATTACGGCAC TCAGTTATTT TTCTGAGGCG AAGAACGAAG GCAGCGATGT TTATAAGACT ATACAGGGTG GTCTTACCTA TCTTAACGAC GTGCAAGATG CTGACACGGC GGCCATAGTC CGTATAGAAG GTGACAGCAC CTTTTCCTCT GCTGAAACAC TGCTGGCACT CAAGTCACTG GGATATACTT TTGACCAGTA TACAGGGACT GCTTCAAAAT GGGTGAAAAA TTCCCGGACG AAAACTATAA CTCAGTGCAT AAAGGCAGTG AACAAATGGG GTGACGCCGG ACGCCTGGAC AGGCTGATTA GACTTTTGGC AGACCGGCAA AAAGCAGAGG ATCCGGGTAA AGGTTCTTTT GAAAACAGCG TATACAGCGA TATGTGGGCT TATTTAGCCC TTGGTGAAGC CGGAAAGCTT GACGGGCTTA ACACCGGCGA TGCTAAAACG TATATTTTAT CTAAGCAGGA TACTTCCGGT TCCTGGGGAG AAATCTTTGA TCAATACTAC CCTGATTTCC TTTCCACAGC ACAGGCTATC CGGTCGCTCA GCTATCTGCC GGAAGCCGGT GAGGCAGATG TTCAGGCAGC AATAAATAAA GGTCTGAATT ATCTGAAAAC CCTTCAGCGG GATGACGGCA GCGTTAGCGC AAAAGATGAT GACCCTGCTG TAGATAATTC TGAGCTAATC ATAACTTTAA ATAGATTGAA TATAGATCCA CAAGGTGCTG AATGGACAAA AACTGTTGAT GGCAAAAAAT TTACTCCGGT ATCTTATCTG ATGAATAACA CAATGAATGC CGATGGCAGC TTTGGCGCAT CTAAAAATGT TTTTGGAGCC ACTGAAGCAC TTTATGCATA TTTAATTCAG GACGGTACCG GTAACCCTGG CGGAGACGGT CCAGGAGGCG GCTCGTCTGA GAACCGGTGC AGTGTTAATA TCGCGATAGT GGGAAAGGAC GACGAAATTA TTTACAGACC GGGCAGTGTT ATCCTGGATA AAACTTCAAA ATGGGGTATT ACTGCTATGG GCGCACTCCA TGCCACAGGT TTGAGCTATG TAGGCGACAG CAGTTTTGTT AAGAGCATTG ATGGGCTGGC TAACAGCGGC ATGAACGGGT GGATGTACAG TGTTAACGGG GTTGTGCCTA TGACTACTGC TTCTGATAAA GTGGTTAAAG AGGGGGATAG GGTAATCTGG TGGTATAGTA CGGATATGAA TTCATCAGGA CCTAGTTGGG ACAGTCTCTT AAAAGGATCT GCAGGTGCCG GGGGCAATCA GTCGGCAGCT GCTTCATCAA CTAGCCTCAT TGAGCAAAAT AAAGAACTTC CAGATGCATT GCAGGTTTCG GAAAAGGCTC TGGCAGCGCT GGAGCAGATA GCCCTGCTGC TTAATCCTCA AGACATTGAA AAAGAAAATA CATTGGATGC ATCGGTTCAG GACGACGAGA TTAATAATGT AATTGTAGTA GGCAGCAGGC AGCCTTTAAA TCTGGCTTTG CTCAAAACAT TAAAAAAGGA ACTGGATCAG AATGAGGTAC AGTTAACACA AAAAGTTGAA GCGGACAGTG GAGCTGTCCT GTTGGATGCC AAAGAGGAAC TGGCTCTGGT TATTCCGGCT AAGTCACTTA ATAAGGATAT GGAAATAAAC GTTAAGGAAG CAGCTGCCGG CAATCAGCAG GAAACTGCCG CACCGTCAGG TTTTCGTCAG GTGTCAGCAA TTTACGATTT TGGTCCCAAA GATACTGTTT TTACTATGCC GGCGACATTA ACCTTTAAGC TGGTTATGCC TCCTTTGGTT AAGCCGGATA GACTGGTTTT GGCCTATTAC GATAAAGTTG CCGGCAAGTG GGTATCTGTC CCTGCTGTTG TGGATTTGGA TAAAGGTTTA GTCCTGACCA AGCTGCGGCA TTTAGGACAA TATGCGGTTT TTGCCCGCGA GTCTTTGAAG ACCTTTGCTG ATGTAAACGA AACTTCTTCT AGTTGGGCTA AAGATTATAT AGAAAATCTG GCCGGGGCCG GAATTGTTGA CGGTATAGAT GCTACACACT TTGAACCGTC AAGAAAGGTG ACCAGGGCAG AATTGACCAG TTTATTGGTT AAAGCCTTAG GCATATCCAC AGATCAAAGC TCTGCTATCT CTCTGAAGGA TGTTCAAGCC GATGATTGGT ACGCGGGGGC GGTTGGGGCA GCTCAGGCAG CCGGTTTGAT TACCGGCTAT GAAGACGGCA CTTTCCGGCC GGGCAACACT GTTAGCCGTG AAGAACTGGC GGTAATTCTG GTGCGCGCAA TGAAACTTGA GTCTGACCAG GAAAAAATGT GGTTTGCCGA CATAGATAAG ATTAACTCCT GGGCCAGAGA CAGTGTGTTC ACAGCTTCAT CAAAAGGTCT CATAAAAGGT TTTCCTGATG GAACTTTTCG TCCTGATGTT GCTGCCGGCC GGGATGAGTG TGCGGTTATA ATCTTTAGGA TGTTGAATGA ATATTAA
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Protein sequence | MRRKNTKLQF ITLSVMIFFI LNIIQFSGLT SQSANGQEAV YTSAEMAAKA VDFINDKYKA GEKIDGYTAY VLAMAGQDLS SEKWSINGTS LRSEIENLAD LMGNNVNLIN YVCLTQNNDG SFGPYANEYG TKVPLQALST VKEDITVGSD VYNQVQSAID NAVNFFKTKY QNGGMTYDVN GWSFDYRCVE ALAKSGEDLS VGGWVYNGVS LKDSIMLSAN STARSIKKDS SVQDAVYLSK ELTALYAVDK ASTDIDVLAG AITAKQNGDG SFGTNMFDHI MVLNALGKAG AISNIDQTKA FNFIDNLKEI HKNSWGQDAG VAWGSQYTSG FEESDTTAQV ITALSYFSEA KNEGSDVYKT IQGGLTYLND VQDADTAAIV RIEGDSTFSS AETLLALKSL GYTFDQYTGT ASKWVKNSRT KTITQCIKAV NKWGDAGRLD RLIRLLADRQ KAEDPGKGSF ENSVYSDMWA YLALGEAGKL DGLNTGDAKT YILSKQDTSG SWGEIFDQYY PDFLSTAQAI RSLSYLPEAG EADVQAAINK GLNYLKTLQR DDGSVSAKDD DPAVDNSELI ITLNRLNIDP QGAEWTKTVD GKKFTPVSYL MNNTMNADGS FGASKNVFGA TEALYAYLIQ DGTGNPGGDG PGGGSSENRC SVNIAIVGKD DEIIYRPGSV ILDKTSKWGI TAMGALHATG LSYVGDSSFV KSIDGLANSG MNGWMYSVNG VVPMTTASDK VVKEGDRVIW WYSTDMNSSG PSWDSLLKGS AGAGGNQSAA ASSTSLIEQN KELPDALQVS EKALAALEQI ALLLNPQDIE KENTLDASVQ DDEINNVIVV GSRQPLNLAL LKTLKKELDQ NEVQLTQKVE ADSGAVLLDA KEELALVIPA KSLNKDMEIN VKEAAAGNQQ ETAAPSGFRQ VSAIYDFGPK DTVFTMPATL TFKLVMPPLV KPDRLVLAYY DKVAGKWVSV PAVVDLDKGL VLTKLRHLGQ YAVFARESLK TFADVNETSS SWAKDYIENL AGAGIVDGID ATHFEPSRKV TRAELTSLLV KALGISTDQS SAISLKDVQA DDWYAGAVGA AQAAGLITGY EDGTFRPGNT VSREELAVIL VRAMKLESDQ EKMWFADIDK INSWARDSVF TASSKGLIKG FPDGTFRPDV AAGRDECAVI IFRMLNEY
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