Gene Dtox_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0538 
Symbol 
ID8427473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp551136 
End bp552071 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content36% 
IMG OID645032903 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003190081 
Protein GI258513859 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.396259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TTAAACTAAT TTTAAAGCGA TTGCTGCAAA TAATCCCTAT GTTAATAATA 
GTCACTATTT TGGCTTTTGC TTTAAGTAAT ATGTCATCGG GTGATGTTGC AGAGGTAACT
ATCCGCAGCC AGGGCTTAGA GGTTACAGAA AAGAATGTTG CTGCAGCACG GGAAGAGTTG
GGGTTAAATG CACCGCTTCA TATTCAGTAT ATTAATTGGT TGAAAAAAGC GGTTAAATTT
GATTTTGGTA TATCATTCCA AACAAAAAAG CCTGTTTCAG ATGAAATACT ATCGAGATTT
CCCGCTACTC TTAAGCTAGC TATTGCAGCG ACGGTTATTT CAATACTATT TGCAATTCCG
GCAGCCCTTA TTTCAGCCAG ATACAAGGAT TCACTGATTG ACCACCTATT CAGAATCGCA
TCTACTTTTG GTGCAACATT GCCGGATTTC TGGCTCGGTC TAATGCTTCT ATATGTTTTT
GCGGTTCAGT TGAATATCTT TCCTGTTATT TCCGGGAATA AATTGCAAAA CATATTTCTT
CCGGCTTTTA CGCTTAGTGT AAATTATGGT GCCATATATA TGCGGGTTTT GAGAAACAAT
CTCATAGAAA TAACTAATTA TGACTATATG AGAGCTGCAA GAGCAAGAGG TTTAAGCCGA
AATGCCGTAT TGCTAAAGCA TGGATTAAAA AACGCTGTAC TCCCATGCAT AACTCTTATA
GGTGTAGACT TTGGAAAGCT TTTGGCAGGT CAATTTGCTT GTGAGACCAT CTTTTCTTGG
AACGGAATAG GGGAATTCGC GATTGACAGT ATTAAACTAA AAGATTTACC TGTTATTCAA
GGATATATAA TGATCGTTGC AGTAACTTTT ATTGCCGTAA ATCTTTTGCT TGATATTTTA
TATCTTTATA TAGACCCTAA GATACAACTT AAATAA
 
Protein sequence
MKKIKLILKR LLQIIPMLII VTILAFALSN MSSGDVAEVT IRSQGLEVTE KNVAAAREEL 
GLNAPLHIQY INWLKKAVKF DFGISFQTKK PVSDEILSRF PATLKLAIAA TVISILFAIP
AALISARYKD SLIDHLFRIA STFGATLPDF WLGLMLLYVF AVQLNIFPVI SGNKLQNIFL
PAFTLSVNYG AIYMRVLRNN LIEITNYDYM RAARARGLSR NAVLLKHGLK NAVLPCITLI
GVDFGKLLAG QFACETIFSW NGIGEFAIDS IKLKDLPVIQ GYIMIVAVTF IAVNLLLDIL
YLYIDPKIQL K