Gene Dtox_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0496 
Symbol 
ID8427431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp508510 
End bp509625 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content48% 
IMG OID645032866 
ProductABC transporter related 
Protein accessionYP_003190044 
Protein GI258513822 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0408811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGTT TATATCTGAA AAATCTATCT AAGACATACC CCTGCAAAGT TGCGGCAGTC 
AGGGACTTTT CTCTGGAAAT AAAGGATCAA GAATTCTTAA TCCTGGTAGG TCCCTCCGGC
TGTGGCAAAA CAACCGTTTT AAGGATGATT GCCGGGCTGG AGGAAATTTC ATCCGGTGAA
TTATATATTG ATGACCGGCC GGTTAATGAC GTGGCTGCCA AGGACCGGGA TATCGCCATG
GTTTTTCAAA ATTATGCTCT TTATCCCCAT CTATCGGTCT ATGACAATAT GGCTTTTGGA
CTTAAGTTGA GAAAGATGCC CAAGGCTGAA ATCAGTAAAA ATGTGCAGGA AGCGGCCAGG
ATTCTTGCCC TTGAAGATCT TCTGAAACGC AAACCCAAGG AACTTTCCGG TGGGCAAAGG
CAAAGGGTGG CCCTGGGACG GGCTATTGTT AGGAAACCAA AGGTTTTCCT GATGGATGAG
CCTCTGTCCA ACCTGGACGC ACAGTTGAGA ACCCAGATGA GAATAGAAAT TGCCAAGCTC
CATAAAAATC TGCAGACAAC CTTTGTTTAT GTAACCCATG ATCAAACTGA AGCCATGACC
ATGGGCACCA GAATCGTGGT GATGAAGGAT GGCCTGATCC AGCAAATTGA CAGCCCGCAA
TCCATCTATG ATCAACCGGT CAATATGTTT GTGGCCGGTT TTCTCGGCAG CCCCGGGATG
AACTTTTTGA AGGTTTTAAT TATCGAGCAA AACGGCTGTA TTTTTGCCAA ACTGGCCGAC
GCTCTGCTGC CTGTTCCCGC TGCCGGGGGA CAAAAGTTAA AAGAGCAGGG GTATCTGGAC
CAGAAAGTGG TCCTGGGGAT AAGAGCGGAG CATCTCTGCG GCAGCGCAAA TTTTTTAGAC
CGCCATCCCG AGTGTGTTTT GTGCGGGAGG CTGGAGTTTA CCGAATTGAG AGGGGCTGAA
ACTTACCATT ATGTAAGGAT AGCCGGCAGG GAGGTGGTTG TCAGGGTGAG TCCGGAGCTG
CACGCCGAAA CTGGACAGGA AGTCAGGGTG GGTTTTAATA TGTCCAAGGC CCATTTTTTC
GATCAGGAAA GTGAGGTGAA CGTCATTAGA CAGTAG
 
Protein sequence
MASLYLKNLS KTYPCKVAAV RDFSLEIKDQ EFLILVGPSG CGKTTVLRMI AGLEEISSGE 
LYIDDRPVND VAAKDRDIAM VFQNYALYPH LSVYDNMAFG LKLRKMPKAE ISKNVQEAAR
ILALEDLLKR KPKELSGGQR QRVALGRAIV RKPKVFLMDE PLSNLDAQLR TQMRIEIAKL
HKNLQTTFVY VTHDQTEAMT MGTRIVVMKD GLIQQIDSPQ SIYDQPVNMF VAGFLGSPGM
NFLKVLIIEQ NGCIFAKLAD ALLPVPAAGG QKLKEQGYLD QKVVLGIRAE HLCGSANFLD
RHPECVLCGR LEFTELRGAE TYHYVRIAGR EVVVRVSPEL HAETGQEVRV GFNMSKAHFF
DQESEVNVIR Q